RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 FSCN2O14926 492 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 PRPF4O43172 522 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TPBGLP0DKB5 382 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 COPB2P35606 906 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 SSR1P43307 286 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GCLCP48506 637 aaPredicted RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ARHGAP4P98171 946 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 BFSP1Q12934 665 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 MUM1Q2TAK8 710 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GJB7Q6PEY0 223 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 OTUD6AQ7L8S5 288 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 SESTD1Q86VW0 696 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ECHDC2Q86YB7 292 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 LARGE2Q8N3Y3 721 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GDAP1Q8TB36 358 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ZNF564Q8TBZ8 553 aaPredicted RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 DNAJC9Q8WXX5 260 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ERP27Q96DN0 273 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 DTNBP1Q96EV8 351 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 RMDN2Q96LZ7 410 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 NUDCD1Q96RS6 583 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 CCDC28BQ9BUN5 200 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GPR88Q9GZN0 384 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GPCPD1Q9NPB8 672 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 PAPOLBQ9NRJ5 636 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 SCOCQ9UIL1 159 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 LNPEPQ9UIQ6 1025 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GTF3C4Q9UKN8 822 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 LRCH1Q9Y2L9 728 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 PTPN22Q9Y2R2 807 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 GAKO14976 1311 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 CLIC2O15247 247 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TGFB1I1O43294 461 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 EXOC3O60645 756 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ZWINTO95229 277 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 LINGO3P0C6S8 592 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TAC1P20366 129 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 VHLP40337 213 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 MESDQ14696 234 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TRIM68Q6AZZ1 485 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 DNAAF5Q86Y56 855 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TDRPQ86YL5 185 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ARHGAP24Q8N264 748 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 UHMK1Q8TAS1 419 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TMEM174Q8WUU8 243 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 KRT35Q92764 455 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 TRIM11Q96F44 468 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 SETDB2Q96T68 719 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 BHMT2Q9H2M3 363 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 DNAJC18Q9H819 358 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 PNMA3Q9UL41 463 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 THRAP3Q9Y2W1 955 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
SMYD3-201ENST00000366516 EP400Q96L91 3159 aa9.7□□□□□ -0.86
SMYD3-201ENST00000366516 ZMYM2Q9UBW7 1377 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 FOCADQ5VW36 1801 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 ZNF536O15090 1300 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 A8MUI8 341 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 RASA4BC9J798 803 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 PMM2O15305 246 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 RASA4O43374 803 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 PEX11AO75192 247 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 CYP1A2P05177 515 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 TROVE2P10155 538 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 PYGMP11217 842 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 MARK3P27448 753 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 PTPN4P29074 926 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SLC1A1P43005 524 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 ITPK1Q13572 414 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 RASA2Q15283 850 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 CCDC6Q16204 474 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SLC45A4Q5BKX6 768 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 CWF19L1Q69YN2 538 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SRRM1Q8IYB3 904 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 LRRC47Q8N1G4 583 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 ARHGAP18Q8N392 663 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 GALNT15Q8N3T1 639 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 MYCT1Q8N699 235 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 ATL2Q8NHH9 583 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 LRRC8CQ8TDW0 803 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 DCAF4Q8WV16 495 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 DDX23Q9BUQ8 820 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 FAM192AQ9GZU8 254 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 MYLK2Q9H1R3 596 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SSU72Q9NP77 194 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 LARSQ9P2J5 1176 aaKnown RBP9.69□□□□□ -0.86
SMYD3-201ENST00000366516 GGT7Q9UJ14 662 aa9.69□□□□□ -0.86
SMYD3-201ENST00000366516 ANAPC5Q9UJX4 755 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms