RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CCDC8Q9H0W5 538 aaPredicted RBP9.31□□□□□ -0.92
YBX3-204ENST00000366290 USP40Q9NVE5 1235 aa9.31□□□□□ -0.92
YBX3-204ENST00000366290 GPR160Q9UJ42 338 aa9.31□□□□□ -0.92
YBX3-204ENST00000366290 CDK5RAP2Q96SN8 1893 aa9.31□□□□□ -0.92
YBX3-204ENST00000366290 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
YBX3-204ENST00000366290 CCDC66A2RUB6 948 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 MANSC4A6NHS7 340 aaPredicted RBP9.3□□□□□ -0.92
YBX3-204ENST00000366290 PAX4O43316 350 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 NPTXRO95502 500 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 LDHCP07864 332 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 PYGMP11217 842 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 BTDP43251 543 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 DNM2P50570 870 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 IGBP1P78318 339 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 NLRX1Q86UT6 975 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 AACSQ86V21 672 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 OTUD7AQ8TE49 926 aaPredicted RBP9.3□□□□□ -0.92
YBX3-204ENST00000366290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.92
YBX3-204ENST00000366290 FAM126AQ9BYI3 521 aaPredicted RBP9.3□□□□□ -0.92
YBX3-204ENST00000366290 ZNF112Q9UJU3 913 aa9.3□□□□□ -0.92
YBX3-204ENST00000366290 COA3Q9Y2R0 106 aaPredicted RBP9.3□□□□□ -0.92
YBX3-204ENST00000366290 GSTA4O15217 222 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 ITGB5P18084 799 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 RGS3P49796 1198 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 CYP4F8P98187 520 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 NUCB1Q02818 461 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 VGLL4Q14135 290 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 SEPT7Q16181 437 aaKnown RBP9.29□□□□□ -0.92
YBX3-204ENST00000366290 ANKRD45Q5TZF3 282 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 C16orf59Q7L2K0 433 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 ZFPM1Q8IX07 1006 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 CLASRPQ8N2M8 674 aaKnown RBP9.29□□□□□ -0.92
YBX3-204ENST00000366290 ZNF341Q9BYN7 854 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 EPB41L1Q9H4G0 881 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 CATSPERZQ9NTU4 200 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 RAI14Q9P0K7 980 aa9.29□□□□□ -0.92
YBX3-204ENST00000366290 A0A1W2PQJ5 194 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 M0R2C6 588 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 GNAT1P11488 350 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 POU3F3P20264 500 aaPredicted RBP9.28□□□□□ -0.92
YBX3-204ENST00000366290 GALK1P51570 392 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 ANAPC15P60006 121 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 TCP10Q12799 353 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 SNX17Q15036 470 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 TMEM177Q53S58 311 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 MROH9Q5TGP6 573 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 ERO1BQ86YB8 467 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 CERS3Q8IU89 383 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 RIOX2Q8IUF8 465 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 AFAP1L2Q8N4X5 818 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 OPTNQ96CV9 577 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 SHISA4Q96DD7 197 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 WRNIP1Q96S55 665 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 ORAI3Q9BRQ5 295 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 DDX4Q9NQI0 724 aaKnown RBP9.28□□□□□ -0.92
YBX3-204ENST00000366290 PIH1D3Q9NQM4 214 aaKnown RBP9.28□□□□□ -0.92
YBX3-204ENST00000366290 CBLCQ9ULV8 474 aa9.28□□□□□ -0.92
YBX3-204ENST00000366290 SIPA1L1O43166 1804 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 DDTLA6NHG4 134 aaPredicted RBP9.27□□□□□ -0.93
YBX3-204ENST00000366290 CBX4O00257 560 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 NFKB2Q00653 900 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 CAP1Q01518 475 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 BICRALQ6AI39 1079 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 NAA16Q6N069 864 aaPredicted RBP9.27□□□□□ -0.93
YBX3-204ENST00000366290 MIGA2Q7L4E1 593 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 OVCH1Q7RTY7 1134 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 ADGRA1Q86SQ6 560 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 CABP7Q86V35 215 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 CHD1LQ86WJ1 897 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 KRTAP19-1Q8IUB9 90 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 CISD2Q8N5K1 135 aaKnown RBP9.27□□□□□ -0.93
YBX3-204ENST00000366290 CRTAC1Q9NQ79 661 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 PTPRFP10586 1907 aa9.27□□□□□ -0.93
YBX3-204ENST00000366290 PHIPQ8WWQ0 1821 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 DGKIO75912 1065 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 BAG3O95817 575 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 NTRK1P04629 796 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 IFIT2P09913 472 aaKnown RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 PNLIPP16233 465 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 ATP5JP18859 108 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 PPATQ06203 517 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 SPIRE1Q08AE8 756 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 PPIL2Q13356 520 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 TTF1Q15361 905 aaPredicted RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 PKN2Q16513 984 aaKnown RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 CRY1Q16526 586 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 TSHZ3Q63HK5 1081 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 WWC2Q6AWC2 1192 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 CENPQQ7L2Z9 268 aaPredicted RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 STRA8Q7Z7C7 330 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 SKAP1Q86WV1 359 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 KIF18BQ86Y91 864 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 ABHD4Q8TB40 342 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 ZKSCAN4Q969J2 545 aaPredicted RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 CCDC136Q96JN2 1154 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 PTPN18Q99952 460 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 RNF32Q9H0A6 362 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 OSBPL5Q9H0X9 879 aaPredicted RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 DHX36Q9H2U1 1008 aaKnown RBP9.26□□□□□ -0.93
YBX3-204ENST00000366290 ZCCHC17Q9NP64 241 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms