RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RECQL4O94761 1208 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 URODP06132 367 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 WEE2P0C1S8 567 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 GUCY2CP25092 1073 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 GLUD2P49448 558 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 PEX3P56589 373 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 TUSC3Q13454 348 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 DCAF4L1Q3SXM0 396 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 ATF7IP2Q5U623 682 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 FUT10Q6P4F1 479 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 TRIM67Q6ZTA4 783 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 GPR149Q86SP6 731 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 CABP7Q86V35 215 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 SYT2Q8N9I0 419 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 TMEM87AQ8NBN3 555 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 RIPOR3Q96MK2 946 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 ACO2Q99798 780 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 ADPGKQ9BRR6 497 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 C17orf75Q9HAS0 396 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 CACNG4Q9UBN1 327 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 SMC3Q9UQE7 1217 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 HCN4Q9Y3Q4 1203 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 PLXNA3P51805 1871 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 C2CD4DB7Z1M9 353 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 ABLIM1O14639 778 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 THP07101 528 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 PLA2G5P39877 138 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 SLC12A3P55017 1021 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 PTPN21Q16825 1174 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 TMEM119Q4V9L6 283 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 XKR4Q5GH76 650 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 ATAT1Q5SQI0 421 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 LILRA6Q6PI73 481 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 ALKAL1Q6UXT8 129 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 C15orf39Q6ZRI6 1047 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 CMASQ8NFW8 434 aaPredicted RBP15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 RABGGTAQ92696 567 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 DRC1Q96MC2 740 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 TIPINQ9BVW5 301 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 RHOBTB2Q9BYZ6 727 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 NT5C3AQ9H0P0 336 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 SFXN1Q9H9B4 322 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 FNIP2Q9P278 1114 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 USTQ9Y2C2 406 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 NR2E1Q9Y466 385 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 PHLPP2Q6ZVD8 1323 aa15.05■□□□□ -0
TNFRSF1A-202ENST00000366159 ZNF318Q5VUA4 2279 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 VWA3AA6NCI4 1184 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 C2CD2LO14523 706 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 BRD1O95696 1058 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 ADH1AP07327 375 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 PROZP22891 400 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 USP41Q3LFD5 358 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 ARSHQ5FYA8 562 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 ZDHHC14Q8IZN3 488 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 LRRC15Q8TF66 581 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 HDAC7Q8WUI4 952 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 KCNN1Q92952 543 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 ASIC4Q96FT7 647 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 B3GALT6Q96L58 329 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 AK8Q96MA6 479 aa15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 PPP1R10Q96QC0 940 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-202ENST00000366159 C2orf16Q68DN1 1984 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 CCDC169A6NNP5 214 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 SFI1A8K8P3 1242 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 SLC26A4O43511 780 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 KIF4AO95239 1232 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 LIG1P18858 919 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 SIGLEC14Q08ET2 396 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 DMP1Q13316 513 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 RTP2Q5QGT7 225 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 CD300LGQ6UXG3 332 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 BRAPQ7Z569 592 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 TMEM161BQ8NDZ6 487 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 SPIRE2Q8WWL2 714 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 CDT1Q9H211 546 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 KCND2Q9NZV8 630 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 GDAQ9Y2T3 454 aa15.03■□□□□ -0
TNFRSF1A-202ENST00000366159 MTCL1Q9Y4B5 1905 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 MUC6Q6W4X9 2439 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 TMEM221A6NGB7 291 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 CASTOR2A6NHX0 329 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 TMEM189-UBE2V1I3L0A0 370 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 M0R296 226 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 MEFVO15553 781 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 TADA2AO75478 443 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 PLS3P13797 630 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 SP100P23497 879 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 IGFBP6P24592 240 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 GRM5P41594 1212 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 CYP26C1Q6V0L0 522 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 CEP120Q8N960 986 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 LNX1Q8TBB1 728 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 TARS2Q9BW92 718 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 BACH2Q9BYV9 841 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms