RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ENDOD1O94919 500 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 HSP90B1P14625 803 aaKnown RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 NCLP19338 710 aaKnown RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 FPR1P21462 350 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 WASP42768 502 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 FLT3LGP49771 235 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 EXOSC10Q01780 885 aaKnown RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 FOXE3Q13461 319 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 TOB2Q14106 344 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 VPS72Q15906 364 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 DCAF17Q5H9S7 520 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 FAM47AQ5JRC9 791 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 GJC2Q5T442 439 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 EFCAB2Q5VUJ9 269 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 NAIF1Q69YI7 327 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 SYT12Q8IV01 421 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 RNF169Q8NCN4 708 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 CACTINQ8WUQ7 758 aaKnown RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZNF503Q96F45 646 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZNF703Q9H7S9 590 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 SPON1Q9HCB6 807 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 AURKAIP1Q9NWT8 199 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 SERPINB13Q9UIV8 391 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 AJAP1Q9UKB5 411 aaPredicted RBP4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 LIMCH1Q9UPQ0 1083 aa4.3□□□□□ -1.72
RNU4-48P-201ENST00000365559 PNPLA7Q6ZV29 1317 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 TBKBP1A7MCY6 615 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 FAM171A2A8MVW0 826 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 GRXCR1A8MXD5 290 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 CXorf49A8MYA2 514 aaPredicted RBP4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 GOLGA6L6A8MZA4 724 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 PRR5-ARHGAP8B1AHC4 643 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 FAM20BO75063 409 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZRANB2O95218 330 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 AMY1AP04745 511 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 PDGFRBP09619 1106 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 CCND1P24385 295 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 EDNRBP24530 442 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 PCSK1P29120 753 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 ALDH1A3P47895 512 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 SLC25A3Q00325 362 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 KIF23Q02241 960 aaPredicted RBP4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 BMT2Q1RMZ1 405 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 C3orf36Q3SXR2 165 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 MIIPQ5JXC2 388 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 METTL24Q5JXM2 366 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 AFMIDQ63HM1 303 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZGPATQ8N5A5 531 aaKnown RBP4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 CCHCR1Q8TD31 782 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 RAB24Q969Q5 203 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 COA7Q96BR5 231 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 PLEKHG4BQ96PX9 1271 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 C7orf25Q9BPX7 421 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 SENP6Q9GZR1 1112 aaPredicted RBP4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 VPS11Q9H270 941 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 LANCL2Q9NS86 450 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 SPEF1Q9Y4P9 236 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 IPPQ9Y573 584 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 ACTL7AQ9Y615 435 aa4.29□□□□□ -1.72
RNU4-48P-201ENST00000365559 LEFTY2O00292 366 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 HTRA2O43464 458 aaPredicted RBP4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 APOBEC3AP31941 199 aaPredicted RBP4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 NEK2P51955 445 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 SLC16A1P53985 500 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 SP140Q13342 867 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 IL10RAQ13651 578 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 RABL3Q5HYI8 236 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 IGFL4Q6B9Z1 124 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 DRICH1Q6PGQ1 229 aaPredicted RBP4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 CRIP3Q6Q6R5 217 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 RHOT1Q8IXI2 618 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 Q8N1X5 172 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 OR10H5Q8NGA6 315 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 TFAP2CQ92754 450 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 CHMP4CQ96CF2 233 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 MYOCQ99972 504 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 NDC1Q9BTX1 674 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 MRI1Q9BV20 369 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 CSRNP2Q9H175 543 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 TYW1Q9NV66 732 aaKnown RBP4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 PARPBPQ9NWS1 579 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 SLC23A1Q9UHI7 598 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 SAP30BPQ9UHR5 308 aaKnown RBP4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 SORCS3Q9UPU3 1222 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 PCDHA13Q9Y5I0 950 aa4.28□□□□□ -1.72
RNU4-48P-201ENST00000365559 MYBBP1AQ9BQG0 1328 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 CCDC154A6NI56 674 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 PJA2O43164 708 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 GPR32O75388 356 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 ALDH1L1O75891 902 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 SNUPNO95149 360 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 RAP2AP10114 183 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 IL2RBP14784 551 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 RECQLP46063 649 aaPredicted RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 ADKP55263 362 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 CLRN1P58418 232 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms