RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 MGEA5O60502 916 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 JUNP05412 331 aaKnown RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 VSIG10L2P0DP72 767 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 MYF5P13349 255 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 TYRP14679 529 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 GYPEP15421 78 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 TAL1P17542 331 aaPredicted RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 SYN1P17600 705 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 MALP21145 153 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 PER3P56645 1201 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 MESP2Q0VG99 397 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 SNAPC2Q13487 334 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 PLS1Q14651 629 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 SSPNQ14714 243 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 GAGE13Q4V321 117 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 CCDC157Q569K6 752 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 FAM26FQ5R3K3 315 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 APOA5Q6Q788 366 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 RSPH3Q86UC2 560 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 TRMT2AQ8IZ69 625 aaKnown RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZGPATQ8N5A5 531 aaKnown RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 CCHCR1Q8TD31 782 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 PARD3BQ8TEW8 1205 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZNF526Q8TF50 670 aaPredicted RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 CASKIN2Q8WXE0 1202 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 GCDHQ92947 438 aaPredicted RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 MTFMTQ96DP5 389 aaKnown RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 SLC35A4Q96G79 324 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 APIPQ96GX9 242 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 TMX3Q96JJ7 454 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 BTBD1Q9H0C5 482 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 BARX1Q9HBU1 254 aaPredicted RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 JADE2Q9NQC1 790 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 LANCL2Q9NS86 450 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 LMBRD1Q9NUN5 540 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 PNPOQ9NVS9 261 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 PCDHA3Q9Y5H8 950 aa4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 MYBBP1AQ9BQG0 1328 aaKnown RBP4.68□□□□□ -1.66
RNU6-28P-201ENST00000362378 CFAP69A5D8W1 941 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 H3BUI4 141 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 PHGDHO43175 533 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ADCY6O43306 1168 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ITGA10O75578 1167 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 TOX4O94842 621 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 KRT1P04264 644 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 MYL3P08590 195 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 FTH1P19P0C7X4 201 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZNF888P0CJ79 500 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZKSCAN1P17029 563 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 RPL17P18621 184 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 PI3P19957 117 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 DDCP20711 480 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 SARSP49591 514 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ADCY7P51828 1080 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 CTXN1P60606 82 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ADAM8P78325 824 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 HGFACQ04756 655 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 IFIT5Q13325 482 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 MTM1Q13496 603 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 NFYCQ13952 458 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 SAFB2Q14151 953 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 LONRF1Q17RB8 773 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZMAT1Q5H9K5 638 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 C10orf62Q5T681 223 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 TSHZ1Q6ZSZ6 1077 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 USP30Q70CQ3 517 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZNF572Q7Z3I7 529 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 SRLQ86TD4 932 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 COL23A1Q86Y22 540 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 FAM186BQ8IYM0 893 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 TXNDC5Q8NBS9 432 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ANKS1AQ92625 1134 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 PHKBQ93100 1093 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 RAB24Q969Q5 203 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 PGBD4Q96DM1 585 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 MBD6Q96DN6 1003 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 NT5C1BQ96P26 610 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 UHRF1Q96T88 793 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 VRK1Q99986 396 aaPredicted RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 KIAA1683Q9H0B3 1180 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ENKD1Q9H0I2 346 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 SLC6A15Q9H2J7 730 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 WDCPQ9H6R7 721 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ZMAT3Q9HA38 289 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 TMEM140Q9NV12 185 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 RTEL1Q9NZ71 1219 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 DAAM1Q9Y4D1 1078 aa4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 RBM8AQ9Y5S9 174 aaKnown RBP4.67□□□□□ -1.66
RNU6-28P-201ENST00000362378 ATRNL1Q5VV63 1379 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 NT5C1B-RDH14C9J2C7 533 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 NRP1O14786 923 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 FFAR3O14843 346 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 GPR32O75388 356 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 CYP1A1P04798 512 aaPredicted RBP4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 IL2RBP14784 551 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 DUSP2Q05923 314 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 SP140Q13342 867 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 GADL1Q6ZQY3 521 aa4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 SYDE1Q6ZW31 735 aaPredicted RBP4.66□□□□□ -1.66
RNU6-28P-201ENST00000362378 DPP9Q86TI2 863 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms