RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 INO80BQ9C086 356 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-201ENST00000361866 PCDHGC5Q9Y5F6 944 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 FAM47DPA6NHR8 397 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 ZBTB39O15060 712 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 FSBPO95073 299 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 SGPL1O95470 568 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 NQO1P15559 274 aaKnown RBP14.78□□□□□ -0.04
COL6A1-201ENST00000361866 QARSP47897 775 aaKnown RBP14.78□□□□□ -0.04
COL6A1-201ENST00000361866 KDSRQ06136 332 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 RHOT1Q8IXI2 618 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 HEY1Q9Y5J3 304 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 COPEO14579 308 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 MSH4O15457 936 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 QPCTQ16769 361 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 RHPN2Q8IUC4 686 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 TBC1D16Q8TBP0 767 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 PRCCQ92733 491 aaPredicted RBP14.77□□□□□ -0.04
COL6A1-201ENST00000361866 ZSWIM1Q9BR11 485 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 MMTAG2Q9BU76 263 aaKnown RBP14.77□□□□□ -0.04
COL6A1-201ENST00000361866 CYP4F11Q9HBI6 524 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 NGRNQ9NPE2 291 aaKnown RBP14.77□□□□□ -0.04
COL6A1-201ENST00000361866 ACP6Q9NPH0 428 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 ARL4CP56559 192 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 NFIAQ12857 509 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 PIP4K2CQ8TBX8 421 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 ARHGEF26Q96DR7 871 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 INPP4AQ96PE3 977 aaPredicted RBP14.77□□□□□ -0.04
COL6A1-201ENST00000361866 DNAI2Q9GZS0 605 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 YY1AP1Q9H869 796 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 ABCF3Q9NUQ8 709 aa14.77□□□□□ -0.04
COL6A1-201ENST00000361866 GPR75-ASB3A0A0A6YYF3 556 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 CFLARO15519 480 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 CPP00450 1065 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 P4HBP07237 508 aaKnown RBP14.77□□□□□ -0.05
COL6A1-201ENST00000361866 SRGAP2CP0DJJ0 459 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 RALAP11233 206 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 ITIH2P19823 946 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 CCND1P24385 295 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 GNA15P30679 374 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 NPEPPSP55786 919 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 IGBP1P78318 339 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 PPP6R3Q5H9R7 873 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-201ENST00000361866 NT5DC3Q86UY8 548 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 ATP8B4Q8TF62 1192 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 SPIRE2Q8WWL2 714 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 KRT35Q92764 455 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 MSTO1Q9BUK6 570 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
COL6A1-201ENST00000361866 NEU2Q9Y3R4 380 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 ATP5HO75947 161 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 ATP6V1G2O95670 118 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 TNNC2P02585 160 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 ACOT2P49753 483 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 MAP7Q14244 749 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 STAT4Q14765 748 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 C1orf146Q5VVC0 180 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 C4orf32Q8N8J7 132 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 SLC35C1Q96A29 364 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 CBWD1Q9BRT8 395 aa14.77□□□□□ -0.05
COL6A1-201ENST00000361866 SCAF8Q9UPN6 1271 aaKnown RBP14.77□□□□□ -0.05
COL6A1-201ENST00000361866 DCDC2CA8MYV0 355 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 WDR64B1ANS9 1081 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 RPL21P46778 160 aaKnown RBP14.76□□□□□ -0.05
COL6A1-201ENST00000361866 CAV1Q03135 178 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 KIF22Q14807 665 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 NAIF1Q69YI7 327 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-201ENST00000361866 NME8Q8N427 588 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 RMDN3Q96TC7 470 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 FGFBP2Q9BYJ0 223 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 OSBPL8Q9BZF1 889 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 IKZF4Q9H2S9 585 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 PEAK1Q9H792 1746 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 TLR2O60603 784 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 MAGEA4P43358 317 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 SH3GL2Q99962 352 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 ZNF341Q9BYN7 854 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 GGPS1O95749 300 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 RARGP13631 454 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 PTENP60484 403 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 PLA2G4FQ68DD2 849 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
COL6A1-201ENST00000361866 FAF2Q96CS3 445 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 FAM81BQ96LP2 452 aa14.76□□□□□ -0.05
COL6A1-201ENST00000361866 POP1Q99575 1024 aaKnown RBP14.76□□□□□ -0.05
COL6A1-201ENST00000361866 NDC80O14777 642 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 LPXNO60711 386 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 PPP4CP60510 307 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 SNRNP35Q16560 246 aaKnown RBP14.75□□□□□ -0.05
COL6A1-201ENST00000361866 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 GPRC5CQ9NQ84 441 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 TAS2R14Q9NYV8 317 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 DLGAP2Q9P1A6 1054 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 IQANK1A0A1B0GTG1 560 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 OR6B2Q6IFH4 312 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 CDC42EP5Q6NZY7 148 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 COL23A1Q86Y22 540 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-201ENST00000361866 C7orf31Q8N865 590 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms