RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 NCOA4Q13772 614 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 CFAP221Q4G0U5 840 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 MTERF4Q7Z6M4 381 aaKnown RBP12.51□□□□□ -0.41
HPS1-204ENST00000361490 TIPINQ9BVW5 301 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 CXCL8P10145 99 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 NSFP46459 744 aaKnown RBP12.51□□□□□ -0.41
HPS1-204ENST00000361490 MXD4Q14582 209 aaPredicted RBP12.51□□□□□ -0.41
HPS1-204ENST00000361490 WHAMMP3Q1A5X7 153 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 GLIPR1L2Q4G1C9 344 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 DCUN1D2Q6PH85 259 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 AGPAT1Q99943 283 aa12.51□□□□□ -0.41
HPS1-204ENST00000361490 SSU72P8A0A1W2PR75 194 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 CNMDO75829 334 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 GPS2Q13227 327 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
HPS1-204ENST00000361490 EEF1DP3Q658K8 133 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 OSBPL9Q96SU4 736 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 NFASCO94856 1347 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 EXTL3O43909 919 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 ADCY3O60266 1144 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 TADA3O75528 432 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 LYPLA2O95372 231 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 PGK1P00558 417 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 CYP2C9P11712 490 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 RFC5P40937 340 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 VPS41P49754 854 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 DGKDQ16760 1214 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 B3GNT9Q6UX72 402 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 SLC35G2Q8TBE7 412 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 ANKRD36BP1Q96IX9 119 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 PCYT2Q99447 389 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 SPC25Q9HBM1 224 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 TMEM8AQ9HCN3 771 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 DDX3XO00571 662 aaKnown RBP eCLIP12.5□□□□□ -0.412e-10■■■■■ 28.4
HPS1-204ENST00000361490 GPC3P51654 580 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
HPS1-204ENST00000361490 ZNF699Q32M78 642 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 TMEM130Q8N3G9 435 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
HPS1-204ENST00000361490 PTPN18Q99952 460 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 EDEM3Q9BZQ6 932 aa12.5□□□□□ -0.41
HPS1-204ENST00000361490 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
HPS1-204ENST00000361490 KRIT1O00522 736 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 STRNO43815 780 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 RRP9O43818 475 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 LDHAP00338 332 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 PLCB3Q01970 1234 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 AMHR2Q16671 573 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 LONRF2Q1L5Z9 754 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 C17orf75Q9HAS0 396 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 ZFYVE28Q9HCC9 887 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 EFNA5P52803 228 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 NCKAP1LP55160 1127 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 NOP14P78316 857 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 DNAJC21Q5F1R6 531 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 DPH5Q9H2P9 285 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 PIN4Q9Y237 131 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 SSC5DA1L4H1 1573 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 ZEB2O60315 1214 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 TOM1L1O75674 476 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 TRPA1O75762 1119 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 PSMC4P43686 418 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 MYL6P60660 151 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 DUOXA2Q1HG44 320 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 RGMBQ6NW40 437 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 LLGL2Q6P1M3 1020 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 IRF2BP2Q7Z5L9 587 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 GPR161Q8N6U8 529 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 DNAJB3Q8WWF6 145 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
HPS1-204ENST00000361490 CNOT8Q9UFF9 292 aaKnown RBP12.49□□□□□ -0.41
HPS1-204ENST00000361490 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 MAPK4P31152 587 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 RAP1GAPP47736 663 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 CDH8P55286 799 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 GUCY2DQ02846 1103 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 KAZNQ674X7 775 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
HPS1-204ENST00000361490 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 DHX33Q9H6R0 707 aaKnown RBP12.48□□□□□ -0.41
HPS1-204ENST00000361490 L2HGDHQ9H9P8 463 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 UBE4BO95155 1302 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 SMPD1P17405 629 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 GNA15P30679 374 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
HPS1-204ENST00000361490 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms