RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 FSCN1Q16658 493 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TCTN1Q2MV58 587 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZACNQ401N2 412 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 FIGNQ5HY92 759 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CTU1Q7Z7A3 348 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZNF467Q7Z7K2 595 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 C12orf56Q8IXR9 622 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ANKRD20A12PQ8NF67 263 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 NEK11Q8NG66 645 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 IFT74Q96LB3 600 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MTMR12Q9C0I1 747 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ADAMTS10Q9H324 1103 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 NXF3Q9H4D5 531 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 PDZD7Q9H5P4 517 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 OSGEPQ9NPF4 335 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TRMT13Q9NUP7 481 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 HMGXB4Q9UGU5 601 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SRRDQ9UH36 339 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 VGLL3A8MV65 326 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ACKR2O00590 384 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZNF185O15231 689 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TSPAN1O60635 241 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 URI1O94763 535 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 HNRNPH3P31942 346 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 NAMPTP43490 491 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RAP1GAPP47736 663 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RBM10P98175 930 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 BIRC3Q13489 604 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 UBXN11Q5T124 520 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZNF618Q5T7W0 954 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CNGA4Q8IV77 575 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 GPD1LQ8N335 351 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 LPPQ93052 612 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CCDC42Q96M95 316 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 PAAF1Q9BRP4 392 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 UNC93B1Q9H1C4 597 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TMEM206Q9H813 350 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 FAM184BQ9ULE4 1060 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 NOC2LQ9Y3T9 749 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 NME7Q9Y5B8 376 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MYH1P12882 1939 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MBLAC1A4D2B0 266 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 CLDN3O15551 220 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ABCB4P21439 1286 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SMTNP53814 917 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RTP1P59025 263 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MYL7Q01449 175 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 GPNMBQ14956 572 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RAB6CQ53S08 254 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 C1orf127Q8N9H9 656 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SLC30A5Q8TAD4 765 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 DIS3LQ8TF46 1054 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 COG1Q8WTW3 980 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MFSD14AQ96MC6 490 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MKNK1Q9BUB5 465 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RAB6CQ9H0N0 254 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SDCBP2Q9H190 292 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RAB20Q9NX57 234 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RBAKQ9NYW8 714 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 COG5Q9UP83 839 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TRIM17Q9Y577 477 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.1□□□□□ -1.91
LTN1-201ENST00000361371 FTCDO95954 541 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 C4BPAP04003 597 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 ATP1A1P05023 1023 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TPM3P06753 285 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 AKR1A1P14550 325 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CHRNB2P17787 502 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ACO1P21399 889 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 CXCR5P32302 372 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 COPB2P35606 906 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RFC5P40937 340 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MATR3P43243 847 aaKnown RBP eCLIP3.1□□□□□ -1.915e-9■■□□□ 14.3
LTN1-201ENST00000361371 RNASE9P60153 205 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TFAMQ00059 246 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 KCNA10Q16322 511 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MAPK6Q16659 721 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ATF7IP2Q5U623 682 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 FAM114A1Q8IWE2 563 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CXorf38Q8TB03 319 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 U2AF1L4Q8WU68 220 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 NLRP7Q8WX94 980 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TFAP2BQ92481 460 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 KHSRPQ92945 711 aaKnown RBP eCLIP3.1□□□□□ -1.918e-7■□□□□ 10
LTN1-201ENST00000361371 CARD6Q9BX69 1037 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 XPNPEP3Q9NQH7 507 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SNTG2Q9NY99 539 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 NXF1Q9UBU9 619 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 LACTBL1A8MY62 500 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TULP2O00295 520 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 GPR32O75388 356 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 KIF20AO95235 890 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 EIF4BP23588 611 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 ATN1P54259 1190 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 INHBEP58166 350 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SNX17Q15036 470 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZNF568Q3ZCX4 644 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CDCA2Q69YH5 1023 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 NFRKBQ6P4R8 1299 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms