RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 GUCY2FP51841 1108 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 USP14P54578 494 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 KCNMA1Q12791 1236 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 SAMD5Q5TGI4 173 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 MYOCDQ8IZQ8 938 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ATL2Q8NHH9 583 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ATG4CQ96DT6 458 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC42Q96M95 316 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 EDEM3Q9BZQ6 932 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 TSGA10Q9BZW7 698 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 NT5C3AQ9H0P0 336 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 KDM3AQ9Y4C1 1321 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 H3BQF6 201 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 MPHOSPH10O00566 681 aaKnown RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 POLR3GO15318 223 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 SUSD5O60279 629 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 SRGAP2O75044 1071 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 IDEP14735 1019 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC96Q2M329 555 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 QRICH1Q2TAL8 776 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ASTE1Q2TB18 679 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 MOXD1Q6UVY6 613 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 FGD2Q7Z6J4 655 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 SPNS2Q8IVW8 549 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 DCAF4Q8WV16 495 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 RPGRIP1Q96KN7 1286 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ARHGEF4Q9NR80 690 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 NYAP2Q9P242 653 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 PCDHA13Q9Y5I0 950 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 FRMD3A2A2Y4 597 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 MEIS2O14770 477 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 IPO7O95373 1038 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 DLGAP3O95886 979 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 VIL1P09327 827 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 EEF2P13639 858 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 RPS26P62854 115 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 FKBP1AP62942 108 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 FKBP3Q00688 224 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 ITKQ08881 620 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 KIF5AQ12840 1032 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 SYCP2LQ5T4T6 812 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 TATDN1Q6P1N9 297 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 USP17L6PQ6QN14 398 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 KRT26Q7Z3Y9 468 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 PODNQ7Z5L7 613 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 C2CD5Q86YS7 1000 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 ZC3H3Q8IXZ2 948 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 ZNF837Q96EG3 531 aaPredicted RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 TSG101Q99816 390 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 IDI2Q9BXS1 227 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 DHX36Q9H2U1 1008 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 SH2D4AQ9H788 454 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 SUGCTQ9HAC7 445 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 FAM207AQ9NSI2 230 aaPredicted RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 PANK4Q9NVE7 773 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 COL11A2P13942 1736 aaPredicted RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 ZNF646O15015 1829 aaPredicted RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 TARSL2A2RTX5 802 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 DDTLA6NHG4 134 aaPredicted RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 LRRC53A6NM62 1247 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 PRLRP16471 622 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 KIF11P52732 1056 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 GPLD1P80108 840 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 SPA17Q15506 151 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 SHROOM1Q2M3G4 852 aaPredicted RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 TM4SF20Q53R12 229 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 UBE3DQ7Z6J8 389 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 LRRTM3Q86VH5 581 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 SECISBP2LQ93073 1101 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 P2RX7Q99572 595 aaKnown RBP8□□□□□ -1.13
CLCN3-202ENST00000360642 CDC6Q99741 560 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 FGFBP2Q9BYJ0 223 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 GBP3Q9H0R5 595 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 PCDHA1Q9Y5I3 950 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 PCDHAC2Q9Y5I4 1007 aa8□□□□□ -1.13
CLCN3-202ENST00000360642 E9PMD0 336 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PJA2O43164 708 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 NOL4O94818 638 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 GSTP1P09211 210 aaKnown RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PLA2G4BP0C869 781 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SLC12A3P55017 1021 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SPIRE1Q08AE8 756 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 NKG7Q16617 165 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PPM1JQ5JR12 505 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 WDR44Q5JSH3 913 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 FAM26FQ5R3K3 315 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PDXDC1Q6P996 788 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 EEPD1Q7L9B9 569 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 ZNF572Q7Z3I7 529 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 TRIM58Q8NG06 486 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 TMEM40Q8WWA1 233 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 IFIH1Q9BYX4 1025 aaKnown RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 KCTD10Q9H3F6 313 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MMRN2Q9H8L6 949 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PRDM16Q9HAZ2 1276 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PI4KBQ9UBF8 816 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms