RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SH3GLB2Q9NR46 395 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 IPO5O00410 1097 aaKnown RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 C2CD2LO14523 706 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 CDX4O14627 284 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 VTNP04004 478 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 IL31Q6EBC2 164 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 DBX2Q6ZNG2 339 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 BAHD1Q8TBE0 780 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 CHAMP1Q96JM3 812 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 UBL7Q96S82 380 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 DUSP15Q9H1R2 295 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 U3KPZ7 1027 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ASH1LQ9NR48 2969 aaKnown RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ANAPC1Q9H1A4 1944 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 SLC14A1Q13336 389 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PPP2R5CQ13362 524 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PLK5Q496M5 336 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 HSF5Q4G112 596 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMEM196Q5HYL7 178 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 RRP12Q5JTH9 1297 aaKnown RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 VITQ6UXI7 678 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 AUTS2Q8WXX7 1259 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PRIMPOLQ96LW4 560 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 CSRNP2Q9H175 543 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ISY1Q9ULR0 285 aaKnown RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 SPAG17Q6Q759 2223 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 A0A0A0MRY4 1105 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ARL5CA6NH57 179 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ATXN7O15265 892 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 RHOBTB1O94844 696 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PBX3P40426 434 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMEM62Q0P6H9 643 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 NCOA7Q8NI08 942 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 FAM3CQ92520 227 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 MKNK1Q9BUB5 465 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 SEC63Q9UGP8 760 aaKnown RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 TPCN1Q9ULQ1 816 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 COL27A1Q8IZC6 1860 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ATG13O75143 517 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZC3H11AO75152 810 aaKnown RBP eCLIP6.72□□□□□ -1.333e-8■■■□□ 18.7
CDC42SE2-201ENST00000360515 RFPL2O75678 378 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 WWC2Q6AWC2 1192 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 SWSAP1Q6NVH7 229 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 SMARCD2Q92925 531 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 KCNB2Q92953 911 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 SSUH2Q9Y2M2 353 aa6.72□□□□□ -1.33
CDC42SE2-201ENST00000360515 PAPSS1O43252 624 aaPredicted RBP6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 GJB3O75712 270 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 CYP21A2P08686 494 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 PSMC3P17980 439 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 EVCP57679 992 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 PTENP60484 403 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 IGBP1P78318 339 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 HSP90AA2PQ14568 343 aaPredicted RBP6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 SART3Q15020 963 aaKnown RBP6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 SPECC1Q5M775 1068 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 TSHZ3Q63HK5 1081 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 SLC23A3Q6PIS1 610 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 ALKAL1Q6UXT8 129 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 ITFG1Q8TB96 612 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 ADAMTS14Q8WXS8 1223 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 HINFPQ9BQA5 517 aa6.71□□□□□ -1.33
CDC42SE2-201ENST00000360515 CEP250Q9BV73 2442 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 NCANO14594 1321 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 FAM208BQ5VWN6 2430 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 A0A1B0GUA9 196 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 E7EWF7 191 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 SYN3O14994 580 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TSPAN1O60635 241 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 DKC1O60832 514 aaKnown RBP eCLIP6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 ZNF883P0CG24 379 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 PTPN2P17706 415 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 PRKCEQ02156 737 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TUSC3Q13454 348 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TYW1BQ6NUM6 668 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 CCNI2Q6ZMN8 369 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TMC8Q8IU68 726 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 EXOC6Q8TAG9 804 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 ETNPPLQ8TBG4 499 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TCP11Q8WWU5 503 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 CHFRQ96EP1 664 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TTPALQ9BTX7 342 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 GPR62Q9BZJ7 368 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 SENP2Q9HC62 589 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 IPPQ9Y573 584 aa6.71□□□□□ -1.34
CDC42SE2-201ENST00000360515 TBX3O15119 743 aa6.7□□□□□ -1.34
CDC42SE2-201ENST00000360515 GDF9O60383 454 aa6.7□□□□□ -1.34
CDC42SE2-201ENST00000360515 PFKLP17858 780 aa6.7□□□□□ -1.34
CDC42SE2-201ENST00000360515 CLCN3P51790 818 aa6.7□□□□□ -1.34
CDC42SE2-201ENST00000360515 HAND2P61296 217 aa6.7□□□□□ -1.34
CDC42SE2-201ENST00000360515 PMS2CLQ68D20 193 aa6.7□□□□□ -1.34
CDC42SE2-201ENST00000360515 C4orf19Q8IY42 314 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms