RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 EXOC7Q9UPT5 735 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 INPP5FQ9Y2H2 1132 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 STYXL1Q9Y6J8 313 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CHD9Q3L8U1 2897 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 COL4A6Q14031 1691 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ZMYM2Q9UBW7 1377 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 LINC01553A4QN01 128 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ARL5CA6NH57 179 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 TULP1O00294 542 aaPredicted RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 FAM189A1O60320 539 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 RECQL4O94761 1208 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 DDHD2O94830 711 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 LINC00271P0C7V0 271 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 CD44P16070 742 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 GARTP22102 1010 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 DNAJB2P25686 324 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 MLH1P40692 756 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 GRM5P41594 1212 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ACOT2P49753 483 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SCNN1GP51170 649 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 TAP1Q03518 808 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SPAG1Q07617 926 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 MORC3Q14149 939 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 NOLC1Q14978 699 aaKnown RBP eCLIP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 RAB30Q15771 203 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 KNOP1Q1ED39 458 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 BMT2Q1RMZ1 405 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SLC10A6Q3KNW5 377 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 NOMO2Q5JPE7 1267 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SPOUT1Q5T280 376 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SLFN12LQ6IEE8 588 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 CRELD2Q6UXH1 353 aaPredicted RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ALKAL1Q6UXT8 129 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ZNF280BQ86YH2 543 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 CMTR2Q8IYT2 770 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ABI1Q8IZP0 508 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 FIBCD1Q8N539 461 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 RDH13Q8NBN7 331 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 GSTCDQ8NEC7 633 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SP7Q8TDD2 431 aaPredicted RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 NOC3LQ8WTT2 800 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 POMGNT1Q8WZA1 660 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 TIFAQ96CG3 184 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SAAL1Q96ER3 474 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 ACAP3Q96P50 834 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 FAM213AQ9BRX8 229 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 C17orf80Q9BSJ5 609 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 TMEM117Q9H0C3 514 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 GBP3Q9H0R5 595 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 NUP62CLQ9H1M0 184 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 KCTD10Q9H3F6 313 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 SEMA6BQ9H3T3 888 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 NRDE2Q9H7Z3 1164 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 UBN1Q9NPG3 1134 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 AGPAT3Q9NRZ7 376 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 RMND1Q9NWS8 449 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 AGO2Q9UKV8 859 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 PLAGL2Q9UPG8 496 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 GIT1Q9Y2X7 761 aa7.01□□□□□ -1.29
SUDS3-201ENST00000360286 MRPL42Q9Y6G3 142 aaKnown RBP7.01□□□□□ -1.29
SUDS3-201ENST00000360286 CITO14578 2027 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 TDRD15B5MCY1 1934 aaKnown RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 LACTBL1A8MY62 500 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 PPP1R3GB7ZBB8 358 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 NT5C1B-RDH14C9J2C7 533 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 RFXAPO00287 272 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 PTGESO14684 152 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 OGTO15294 1046 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 HOXA2O43364 376 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 B4GALT3O60512 393 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 MBD3O95983 291 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 CLTAP09496 248 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 CXCL8P10145 99 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 PBX3P40426 434 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 WNT7BP56706 349 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 ENOX2Q16206 610 aaKnown RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 GLRA4Q5JXX5 417 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 ARMCX5Q6P1M9 558 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 GLB1LQ6UWU2 654 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 Q7L0L9 218 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 APBB1IPQ7Z5R6 666 aaPredicted RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 HACE1Q8IYU2 909 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 ADSSL1Q8N142 457 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 GUF1Q8N442 669 aaKnown RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 URGCPQ8TCY9 931 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 RABGGTAQ92696 567 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 FAM212AQ96EL1 285 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 FAM161BQ96MY7 647 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 ZMAT2Q96NC0 199 aaKnown RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 TTYH1Q9H313 450 aaPredicted RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 RPF1Q9H9Y2 349 aaKnown RBP7□□□□□ -1.29
SUDS3-201ENST00000360286 SLC28A3Q9HAS3 691 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 TBC1D13Q9NVG8 400 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 HSPBP1Q9NZL4 362 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 CACNG4Q9UBN1 327 aa7□□□□□ -1.29
SUDS3-201ENST00000360286 DNAJB4Q9UDY4 337 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms