RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FILIP1Q7Z7B0 1213 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 GPD1LQ8N335 351 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 CSGALNACT2Q8N6G5 542 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 ZSWIM2Q8NEG5 633 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 CEP63Q96MT8 703 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 LBHD1Q9BQE6 289 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 KIAA1586Q9HCI6 787 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 PCDHB2Q9Y5E7 798 aa13.53□□□□□ -0.24
NIF3L1-201ENST00000359683 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 EXOC3O60645 756 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 FGFR1OPO95684 399 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 EPHB4P54760 987 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 MYL5Q02045 173 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 HSP90AA2PQ14568 343 aaPredicted RBP13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 ECHDC2Q86YB7 292 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 DHX40Q8IX18 779 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 THNSL1Q8IYQ7 743 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 DEFB123Q8N688 67 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 CEP120Q8N960 986 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 TRIM6Q9C030 488 aaPredicted RBP13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 CPSF3Q9UKF6 684 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 IPPQ9Y573 584 aa13.52□□□□□ -0.25
NIF3L1-201ENST00000359683 GOLGA8IPA6NC78 632 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 GOLGA8JA6NMD2 632 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 SMTNL1A8MU46 457 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 MAPK13O15264 365 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 EFCAB14O75071 495 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 AKAP3O75969 853 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 EOMESO95936 686 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 FGBP02675 491 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 CLTAP09496 248 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 STAG3L1P0CL83 205 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 CASP4P49662 377 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 ACOT2P49753 483 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 MCCD1P59942 119 aaPredicted RBP13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 TMEM240Q5SV17 173 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 IRF2BP1Q8IU81 584 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 CRIPAKQ8N1N5 446 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 AOPEPQ8N6M6 819 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 NOC3LQ8WTT2 800 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 FAM213AQ9BRX8 229 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 MKNK1Q9BUB5 465 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 SNTG2Q9NY99 539 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
NIF3L1-201ENST00000359683 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 BAIAP3O94812 1187 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 ADRB2P07550 413 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 ACTN1P12814 892 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 TNFSF9P41273 254 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 TPD52L1Q16890 204 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 CEP135Q66GS9 1140 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 CBWD2Q8IUF1 395 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 BORCS6Q96GS4 357 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 MFSD14AQ96MC6 490 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 ACAP3Q96P50 834 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 CCDC94Q9BW85 323 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 HSD3B7Q9H2F3 369 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 NXF3Q9H4D5 531 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 FANCLQ9NW38 375 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 FRMD4BQ9Y2L6 1034 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 HES2Q9Y543 173 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 TTC3P53804 2025 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 MICAL3Q7RTP6 2002 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 SLC16A3O15427 465 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 GNA14O95837 355 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 OSTNP61366 133 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 SLC10A6Q3KNW5 377 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 PSRC1Q6PGN9 363 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.5□□□□□ -0.256e-6■■■□□ 19.1
NIF3L1-201ENST00000359683 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 HACE1Q8IYU2 909 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■□□□□ 9.6
NIF3L1-201ENST00000359683 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
NIF3L1-201ENST00000359683 BECN2A8MW95 431 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 MEFVO15553 781 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 ITGA4P13612 1032 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms