RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PCYT2Q99447 389 aa16.06■□□□□ 0.16
GABPB1-202ENST00000359031 FAM213AQ9BRX8 229 aa16.06■□□□□ 0.16
GABPB1-202ENST00000359031 MED4Q9NPJ6 270 aa16.06■□□□□ 0.16
GABPB1-202ENST00000359031 DMGDHQ9UI17 866 aaKnown RBP16.06■□□□□ 0.16
GABPB1-202ENST00000359031 DIS3Q9Y2L1 958 aaKnown RBP16.06■□□□□ 0.16
GABPB1-202ENST00000359031 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 H3BQF6 201 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 PEX10O60683 326 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 RTN2O75298 545 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 ZMYND10O75800 440 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 GZMAP12544 262 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 ABCB4P21439 1286 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 OSBPP22059 807 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 AARSP49588 968 aaKnown RBP eCLIP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 STAT5BP51692 787 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 EPHB4P54760 987 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 GCNT1Q02742 428 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 C11orf63Q6NUN7 778 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 C15orf39Q6ZRI6 1047 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 SV2AQ7L0J3 742 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 PALB2Q86YC2 1186 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 PSPC1Q8WXF1 523 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 SEPT1Q8WYJ6 367 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 THAP2Q9H0W7 228 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 GOLPH3Q9H4A6 298 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 TMEM134Q9H6X4 195 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 TOPORSQ9NS56 1045 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 TAS2R14Q9NYV8 317 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 CASP8AP2Q9UKL3 1982 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 LRRIQ4A6NIV6 560 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 CCDC188H7C350 402 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 GAS2O43903 313 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 CEP104O60308 925 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 GGPS1O95749 300 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 LDHAP00338 332 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 MYBL2P10244 700 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 USP8P40818 1118 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 PDE6CP51160 858 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 HSP90B2PQ58FF3 399 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 EMBQ6PCB8 327 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 NOP9Q86U38 636 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 IFT20Q8IY31 132 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 GSPT2Q8IYD1 628 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 METTL13Q8N6R0 699 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 FAM71BQ8TC56 605 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 ARHGEF26Q96DR7 871 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 ZIC5Q96T25 663 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 OSGEPQ9NPF4 335 aa16.05■□□□□ 0.16
GABPB1-202ENST00000359031 AGO2Q9UKV8 859 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
GABPB1-202ENST00000359031 K7ERI5 159 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 MTA2O94776 668 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 CLSTN1O94985 981 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 SGPL1O95470 568 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
GABPB1-202ENST00000359031 CHRNB2P17787 502 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 TCF7P36402 384 aaPredicted RBP16.04■□□□□ 0.16
GABPB1-202ENST00000359031 NNTQ13423 1086 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 MOGSQ13724 837 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 FGD4Q96M96 766 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
GABPB1-202ENST00000359031 AZI2Q9H6S1 392 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 GDF3Q9NR23 364 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 C1orf112Q9NSG2 853 aa16.04■□□□□ 0.16
GABPB1-202ENST00000359031 TTC7AQ9ULT0 858 aaPredicted RBP16.04■□□□□ 0.16
GABPB1-202ENST00000359031 DNAJC25-GNG10A0A024R161 153 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 POLR3GO15318 223 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 CYP26A1O43174 497 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 MAFO75444 373 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 LGR5O75473 907 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 FTLP02792 175 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 CYP11B1P15538 503 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 GPC5P78333 572 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 SLC7A5Q01650 507 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 CDR2Q01850 454 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 KCTD2Q14681 263 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 CLUL1Q15846 466 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 RGMBQ6NW40 437 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 ARMC9Q7Z3E5 817 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 EXOC8Q8IYI6 725 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 C2orf69Q8N8R5 385 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 GTF3C2Q8WUA4 911 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-202ENST00000359031 CAVIN3Q969G5 261 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 OPTNQ96CV9 577 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 KRT12Q99456 494 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 MMP19Q99542 508 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 MROH8Q9H579 483 aa16.03■□□□□ 0.16
GABPB1-202ENST00000359031 ADCY3O60266 1144 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms