RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LLGL1Q15334 1064 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 UBAP2Q5T6F2 1119 aaKnown RBP9.22□□□□□ -0.93
RFX3-202ENST00000358730 FKBP1CQ5VVH2 108 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 C6orf89Q6UWU4 347 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 CPLX4Q7Z7G2 160 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 FAM83AQ86UY5 434 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 MAP4K3Q8IVH8 894 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 CACNA2D3Q8IZS8 1091 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 SLC17A8Q8NDX2 589 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 TMEM161BQ8NDZ6 487 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 HELQQ8TDG4 1101 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 TAS1R2Q8TE23 839 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 PARD3BQ8TEW8 1205 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
RFX3-202ENST00000358730 SEC16BQ96JE7 1060 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 CABS1Q96KC9 395 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 TAOK3Q9H2K8 898 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 SEMA4AQ9H3S1 761 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 PASKQ96RG2 1323 aa9.22□□□□□ -0.93
RFX3-202ENST00000358730 PHF20L1A8MW92 1017 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 CTNND1O60716 968 aaKnown RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 ATP9AO75110 1047 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 DLATP10515 647 aaKnown RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 KRT5P13647 590 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 HNRNPH1P31943 449 aaKnown RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 COILP38432 576 aaPredicted RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 KCNJ1P48048 391 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 RWDD2BP57060 319 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 CYP1B1Q16678 543 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 GKAP1Q5VSY0 366 aaPredicted RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 KCNV1Q6PIU1 500 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 RNF207Q6ZRF8 634 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 ARMC9Q7Z3E5 817 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 FBXL13Q8NEE6 735 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 TATDN2Q93075 761 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 PGM2Q96G03 612 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 XPO6Q96QU8 1125 aaKnown RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 RMDN3Q96TC7 470 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 KMT5AQ9NQR1 393 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 UVRAGQ9P2Y5 699 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 USP20Q9Y2K6 914 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 PCDHA3Q9Y5H8 950 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 RGPD3A6NKT7 1758 aaPredicted RBP9.21□□□□□ -0.93
RFX3-202ENST00000358730 RGPD4Q7Z3J3 1758 aa9.21□□□□□ -0.93
RFX3-202ENST00000358730 GOLGA6L7A0A1B0GV03 622 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 C5orf60A6NFR6 353 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 ECEL1O95672 775 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 RARAP10276 462 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 CHN1P15882 459 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 SLCO1A2P46721 670 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 GPC3P51654 580 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 GHRHRQ02643 423 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 ADCY2Q08462 1091 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 PPP1R7Q15435 360 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 CCDC25Q86WR0 208 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 CCDC13Q8IYE1 715 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 EPS8L3Q8TE67 593 aaKnown RBP9.21□□□□□ -0.94
RFX3-202ENST00000358730 POMGNT1Q8WZA1 660 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 LPAR1Q92633 364 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 KIFAP3Q92845 792 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 RUNDC3BQ96NL0 473 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 FAM129AQ9BZQ8 928 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 SLC38A10Q9HBR0 1119 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 RAB20Q9NX57 234 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 CTDP1Q9Y5B0 961 aaPredicted RBP9.21□□□□□ -0.94
RFX3-202ENST00000358730 WDR81Q562E7 1941 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 CLDN3O15551 220 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 SFNP31947 248 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 SOX10P56693 466 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 KRT76Q01546 638 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 ACTN3Q08043 901 aaPredicted RBP9.21□□□□□ -0.94
RFX3-202ENST00000358730 MKRN4PQ13434 485 aaPredicted RBP9.21□□□□□ -0.94
RFX3-202ENST00000358730 SIX1Q15475 284 aaPredicted RBP9.21□□□□□ -0.94
RFX3-202ENST00000358730 ERMARDQ5T6L9 678 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 SUGP1Q8IWZ8 645 aaKnown RBP9.21□□□□□ -0.94
RFX3-202ENST00000358730 BSNDQ8WZ55 320 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 HVCN1Q96D96 273 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 CHMP6Q96FZ7 201 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 ANKEF1Q9NU02 776 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 ANAPC7Q9UJX3 599 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 COQ4Q9Y3A0 265 aa9.21□□□□□ -0.94
RFX3-202ENST00000358730 FER1L6Q2WGJ9 1857 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 HNRNPDLO14979 420 aaKnown RBP9.2□□□□□ -0.94
RFX3-202ENST00000358730 RIPK2O43353 540 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 CALCAP01258 141 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 DRD4P21917 467 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 IFI35P80217 286 aaPredicted RBP9.2□□□□□ -0.94
RFX3-202ENST00000358730 CALCOCO2Q13137 446 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 DRP2Q13474 957 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 SLMAPQ14BN4 828 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 NBPF9Q3BBW0 867 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 ANO5Q75V66 913 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 USP37Q86T82 979 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 DDX1Q92499 740 aaKnown RBP9.2□□□□□ -0.94
RFX3-202ENST00000358730 PDCD2LQ9BRP1 358 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 PI4K2AQ9BTU6 479 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 PLVAPQ9BX97 442 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 PXMP2Q9NR77 195 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms