RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GOLGA8IPA6NC78 632 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 GOLGA8JA6NMD2 632 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 EXTL3O43909 919 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 UPP2O95045 317 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 EOMESO95936 686 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 STAG3L1P0CL83 205 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 ATF7P17544 494 aaPredicted RBP16.61■□□□□ 0.25
TPM1-206ENST00000358278 YARSP54577 528 aaKnown RBP16.61■□□□□ 0.25
TPM1-206ENST00000358278 DEFB103AP81534 67 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 FKBP3Q00688 224 aaKnown RBP16.61■□□□□ 0.25
TPM1-206ENST00000358278 ADAM9Q13443 819 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 NFIL3Q16649 462 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
TPM1-206ENST00000358278 CEP135Q66GS9 1140 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 TTI2Q6NXR4 508 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 NPAS4Q8IUM7 802 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 SLC9A9Q8IVB4 645 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 CSGALNACT2Q8N6G5 542 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 LPPQ93052 612 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 EEF2KMTQ96G04 330 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 RNPC3Q96LT9 517 aaKnown RBP16.61■□□□□ 0.25
TPM1-206ENST00000358278 ACAP3Q96P50 834 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 CXXC1Q9P0U4 656 aaPredicted RBP16.61■□□□□ 0.25
TPM1-206ENST00000358278 FRMD4BQ9Y2L6 1034 aa16.61■□□□□ 0.25
TPM1-206ENST00000358278 TULP1O00294 542 aaPredicted RBP16.6■□□□□ 0.25
TPM1-206ENST00000358278 CETN3O15182 167 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 FAM189A1O60320 539 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 RECQL4O94761 1208 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 CLTAP09496 248 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 AKAP5P24588 427 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 TNFSF9P41273 254 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 FAM189BP81408 668 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 ZBTB41Q5SVQ8 909 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 C9orf50Q5SZB4 431 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 FOXR2Q6PJQ5 311 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 TMEM192Q8IY95 271 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 ZSWIM2Q8NEG5 633 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 ELAC1Q9H777 363 aaKnown RBP16.6■□□□□ 0.25
TPM1-206ENST00000358278 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 TOPORSQ9NS56 1045 aaPredicted RBP16.6■□□□□ 0.25
TPM1-206ENST00000358278 SLC4A7Q9Y6M7 1214 aa16.6■□□□□ 0.25
TPM1-206ENST00000358278 MEIS3P2A8K0S8 358 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 CXCL8P10145 99 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 ZNF598Q86UK7 904 aaKnown RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 ABI1Q8IZP0 508 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 RDH13Q8NBN7 331 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 TMEM174Q8WUU8 243 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 RPF1Q9H9Y2 349 aaKnown RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 RSAD1Q9HA92 442 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 DMAC2Q9NW81 257 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 ZNF233A6NK53 670 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 HOXA2O43364 376 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 SHHQ15465 462 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 FAM117BQ6P1L5 589 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 AGMOQ6ZNB7 445 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 TOP1MTQ969P6 601 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 SLC9A7Q96T83 725 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 KIAA1671Q9BY89 1806 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 UBN1Q9NPG3 1134 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 KLK14Q9P0G3 267 aa16.59■□□□□ 0.25
TPM1-206ENST00000358278 CPSF3Q9UKF6 684 aaKnown RBP16.59■□□□□ 0.25
TPM1-206ENST00000358278 FGFR1OPO95684 399 aaKnown RBP16.58■□□□□ 0.24
TPM1-206ENST00000358278 EPB41P11171 864 aaKnown RBP16.58■□□□□ 0.24
TPM1-206ENST00000358278 FGFR1P11362 822 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 MLH1P40692 756 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 CASP4P49662 377 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 ZNF165P49910 485 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 ZNF445P59923 1031 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 PPP2R3AQ06190 1150 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
TPM1-206ENST00000358278 GLB1LQ6UWU2 654 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 CRELD2Q6UXH1 353 aaPredicted RBP16.58■□□□□ 0.24
TPM1-206ENST00000358278 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 TMCO2Q7Z6W1 182 aaPredicted RBP16.58■□□□□ 0.24
TPM1-206ENST00000358278 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 FBXL18Q96ME1 805 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 RPS6KC1Q96S38 1066 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 GIT1Q9Y2X7 761 aa16.58■□□□□ 0.24
TPM1-206ENST00000358278 CAVIN2O95810 425 aa16.57■□□□□ 0.24
TPM1-206ENST00000358278 ATP2A2P16615 1042 aaKnown RBP16.57■□□□□ 0.24
TPM1-206ENST00000358278 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
TPM1-206ENST00000358278 MYL5Q02045 173 aa16.57■□□□□ 0.24
TPM1-206ENST00000358278 ZC3H3Q8IXZ2 948 aaKnown RBP16.57■□□□□ 0.24
TPM1-206ENST00000358278 FAM186BQ8IYM0 893 aa16.57■□□□□ 0.24
TPM1-206ENST00000358278 ENOX1Q8TC92 643 aaKnown RBP16.57■□□□□ 0.24
TPM1-206ENST00000358278 HELQQ8TDG4 1101 aa16.57■□□□□ 0.24
TPM1-206ENST00000358278 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
TPM1-206ENST00000358278 MED15Q96RN5 788 aa16.57■□□□□ 0.24
TPM1-206ENST00000358278 GAD1Q99259 594 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms