RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MIF4GDA9UHW6 222 aaKnown RBP21.93■■□□□ 1.1
COL13A1-202ENST00000357811 O00370 1275 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 COILP38432 576 aaPredicted RBP21.93■■□□□ 1.1
COL13A1-202ENST00000357811 HSD17B4P51659 736 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 C11orf63Q6NUN7 778 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 C6orf89Q6UWU4 347 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 RNF207Q6ZRF8 634 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 ASIC3Q9UHC3 531 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 VIMP08670 466 aaKnown RBP21.93■■□□□ 1.1
COL13A1-202ENST00000357811 PDE6CP51160 858 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 GKAP1Q5VSY0 366 aaPredicted RBP21.93■■□□□ 1.1
COL13A1-202ENST00000357811 PRPF38AQ8NAV1 312 aaKnown RBP21.93■■□□□ 1.1
COL13A1-202ENST00000357811 TLCD1Q96CP7 247 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 BICD1Q96G01 975 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 NCAPGQ9BPX3 1015 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 FAM213AQ9BRX8 229 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 HERPUD2Q9BSE4 406 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 CHST7Q9NS84 486 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 CTNNAL1Q9UBT7 734 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 TBX20Q9UMR3 447 aa21.93■■□□□ 1.1
COL13A1-202ENST00000357811 MFAP3P55082 362 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 GTF2BQ00403 316 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 KCTD17Q8N5Z5 321 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 PARD3BQ8TEW8 1205 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 HAUS2Q9NVX0 235 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 MTRF1LQ9UGC7 380 aaKnown RBP21.92■■□□□ 1.1
COL13A1-202ENST00000357811 CD2APQ9Y5K6 639 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 PTGER2P43116 358 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 SSR1P43307 286 aaKnown RBP21.92■■□□□ 1.1
COL13A1-202ENST00000357811 KRT39Q6A163 491 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 SPOPLQ6IQ16 392 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 KMT5AQ9NQR1 393 aa21.92■■□□□ 1.1
COL13A1-202ENST00000357811 CTDP1Q9Y5B0 961 aaPredicted RBP21.92■■□□□ 1.1
COL13A1-202ENST00000357811 HNRNPDLO14979 420 aaKnown RBP21.91■■□□□ 1.1
COL13A1-202ENST00000357811 FSBPO95073 299 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 ACTN3Q08043 901 aaPredicted RBP21.91■■□□□ 1.1
COL13A1-202ENST00000357811 SPDYE2Q495Y8 402 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 ANO5Q75V66 913 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 SV2AQ7L0J3 742 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 CNPY4Q8N129 248 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 HELQQ8TDG4 1101 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 CHMP6Q96FZ7 201 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 ADAM7Q9H2U9 754 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 GJB6O95452 261 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 DRD4P21917 467 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 CTNNA2P26232 953 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 EIF3BP55884 814 aaKnown RBP21.91■■□□□ 1.1
COL13A1-202ENST00000357811 SGO2Q562F6 1265 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 CYFIP1Q7L576 1253 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 TMEM161BQ8NDZ6 487 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 SHC3Q92529 594 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 CEP170P1Q96L14 293 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 NT5C1BQ96P26 610 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 ELAC2Q9BQ52 826 aaKnown RBP21.91■■□□□ 1.1
COL13A1-202ENST00000357811 INTS9Q9NV88 658 aaKnown RBP21.91■■□□□ 1.1
COL13A1-202ENST00000357811 MTUS1Q9ULD2 1270 aa21.91■■□□□ 1.1
COL13A1-202ENST00000357811 EGFRP00533 1210 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 NF2P35240 595 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 CHKAP35790 457 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 SPATS2Q86XZ4 545 aaKnown RBP21.9■■□□□ 1.1
COL13A1-202ENST00000357811 LRRC34Q8IZ02 419 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 JPH2Q9BR39 696 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-202ENST00000357811 RAB20Q9NX57 234 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 RFX1P22670 979 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 RWDD2BP57060 319 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 KRT17Q04695 432 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 DMP1Q13316 513 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-202ENST00000357811 SLC39A4Q6P5W5 647 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 CD101Q93033 1021 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 KLHL11Q9NVR0 708 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 TBK1Q9UHD2 729 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 RIPK3Q9Y572 518 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 UBIAD1Q9Y5Z9 338 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 ATP8B3O60423 1300 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 ADGRA3Q8IWK6 1321 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 RASGRF2O14827 1237 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 RIPK2O43353 540 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 ASNSP08243 561 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 CFHP08603 1231 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 MUTP22033 750 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 MAPK4P31152 587 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 PGM5Q15124 567 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 ERMARDQ5T6L9 678 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 ARHGEF16Q5VV41 709 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 SEPT14Q6ZU15 432 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 CCDC50Q8IVM0 306 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 WNT8AQ9H1J5 351 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 GABBR1Q9UBS5 961 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 USTQ9Y2C2 406 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 PCDHA3Q9Y5H8 950 aa21.9■■□□□ 1.1
COL13A1-202ENST00000357811 ECEL1O95672 775 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 RRM1P23921 792 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 FMNL3Q8IVF7 1028 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 ANKRD42Q8N9B4 389 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 FBXL13Q8NEE6 735 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 SLC40A1Q9NP59 571 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 PCYOX1Q9UHG3 505 aa21.89■■□□□ 1.1
COL13A1-202ENST00000357811 PFASO15067 1338 aa21.89■■□□□ 1.09
COL13A1-202ENST00000357811 CDR2Q01850 454 aa21.89■■□□□ 1.09
COL13A1-202ENST00000357811 CALCOCO2Q13137 446 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms