RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PARP2Q9UGN5 583 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CDK5RAP2Q96SN8 1893 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 MIF4GDA9UHW6 222 aaKnown RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 POC1B-GALNT4F8VUJ3 575 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CBX6O95503 412 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 NT5C2P49902 561 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 RBM5P52756 815 aaKnown RBP eCLIP10.84□□□□□ -0.678e-6■■■■□ 20.7
PTPRA-203ENST00000356147 ATP11AP98196 1134 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 KIF22Q14807 665 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 GRIPAP1Q4V328 841 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 TNFAIP8L3Q5GJ75 292 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 C4orf33Q8N1A6 199 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 TAB3Q8N5C8 712 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 MAB21L3Q8N8X9 362 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 EPS8L1Q8TE68 723 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CRYGNQ8WXF5 182 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 ARHGEF3Q9NR81 526 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 TOPORSQ9NS56 1045 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 WDR91A4D1P6 747 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 DDTLA6NHG4 134 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 MAP3K13O43283 966 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 BCRP11274 1271 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 ALAS1P13196 640 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 IL1R1P14778 569 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 GM2AP17900 193 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CCND1P24385 295 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 HOXA7P31268 230 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 THEMIS2Q5TEJ8 643 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 PRR5LQ6MZQ0 368 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 KREMEN1Q96MU8 473 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 MBOAT7Q96N66 472 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 HSD17B14Q9BPX1 270 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 RXFP1Q9HBX9 757 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 NINJ2Q9NZG7 142 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 TNRC6CQ9HCJ0 1690 aaKnown RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 RASA4BC9J798 803 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 CLGNO14967 610 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 RASA4O43374 803 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 HIP1RO75146 1068 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 CYP3A4P08684 503 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 TAC1P20366 129 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 TUBP50607 506 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 RWDD2BP57060 319 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
PTPRA-203ENST00000356147 SLC8A3P57103 927 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 SIAH1Q8IUQ4 282 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 SLF2Q8IX21 1173 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 TTC8Q8TAM2 541 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 SAAL1Q96ER3 474 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 C12orf65Q9H3J6 166 aaKnown RBP10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ANAPC7Q9UJX3 599 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ATAD5Q96QE3 1844 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ENTPD5O75356 428 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 GJB6O95452 261 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 TTC4O95801 387 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ARP10275 920 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ALADP13716 330 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 RRM1P23921 792 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 EPHB2P29323 1055 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 SREBF1P36956 1147 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 VAMP7P51809 220 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ZNF131P52739 623 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 JAG1P78504 1218 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 CERKLQ49MI3 558 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-203ENST00000356147 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 MFSD5Q6N075 450 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 C11orf63Q6NUN7 778 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 INTS8Q75QN2 995 aaKnown RBP10.83□□□□□ -0.68
PTPRA-203ENST00000356147 OTOP1Q7RTM1 612 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 PARD3BQ8TEW8 1205 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 IFT74Q96LB3 600 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 RUNDC3BQ96NL0 473 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 PI4K2AQ9BTU6 479 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPRA-203ENST00000356147 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 ANAPC5Q9UJX4 755 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
PTPRA-203ENST00000356147 GAS7O60861 476 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 NDUFB10O96000 172 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 BMP3P12645 472 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 RAD23BP54727 409 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ICA1Q05084 483 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ZYXQ15942 572 aaKnown RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 Q4G0T1 1027 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 FAM196AQ6ZSG2 479 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ASRGL1Q7L266 308 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 DAW1Q8N136 415 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 SEMA4DQ92854 862 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 CD101Q93033 1021 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 NAP1L4Q99733 375 aaKnown RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 KIFC3Q9BVG8 833 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms