RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 THAP1Q9NVV9 213 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 IL1RAPL1Q9NZN1 696 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TBC1D14Q9P2M4 693 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TBX10O75333 385 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TRMUO75648 421 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PAHP00439 452 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PRLP01236 227 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 IGKV5-2P06315 115 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 P4HA1P13674 534 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ALAS2P22557 587 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 GTF2H1P32780 548 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF135P52742 658 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TFCP2Q12800 502 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 EDRF1Q3B7T1 1238 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 HGSNATQ68CP4 663 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ASRGL1Q7L266 308 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 KBTBD2Q8IY47 623 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 HACE1Q8IYU2 909 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 SCYL3Q8IZE3 742 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 MED30Q96HR3 178 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 KAZALD1Q96I82 304 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TSNARE1Q96NA8 513 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 FANCEQ9HB96 536 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 USP29Q9HBJ7 922 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 RXFP1Q9HBX9 757 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ABHD10Q9NUJ1 306 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 MTRF1LQ9UGC7 380 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PRKAG3Q9UGI9 489 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 DNAJC16Q9Y2G8 782 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 RWDD3Q9Y3V2 267 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 CCDC162PA2VCL2 907 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 K7EPI3 171 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 PSMD11O00231 422 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 PTGS2P35354 604 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 SKIV2L2P42285 1042 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 SLCO1A2P46721 670 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 THOP1P52888 689 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 KRT83P78385 493 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF790Q6PG37 636 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ZBTB46Q86UZ6 589 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 AGGF1Q8N302 714 aaeCLIP9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 NLRP7Q8WX94 980 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 VPS35Q96QK1 796 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 HAUS8Q9BT25 410 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 SHCBP1LQ9BZQ2 653 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF277Q9NRM2 450 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 DCAF16Q9NXF7 216 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ASAP1Q9ULH1 1129 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ARL2BPQ9Y2Y0 163 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ABCB1P08183 1280 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 PAEPP09466 180 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 CASP1P29466 404 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 GRIA2P42262 883 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 MED21Q13503 144 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 RFWD3Q6PCD5 774 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 RHOT2Q8IXI1 618 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 ANKRD13CQ8N6S4 541 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 PLEKHO2Q8TD55 490 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 BCL7CQ8WUZ0 217 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 MTMR9Q96QG7 549 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 CCDC77Q9BR77 488 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 GIMAP4Q9NUV9 329 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 GIN1Q9NXP7 522 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 KCTD5Q9NXV2 234 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 SNX12Q9UMY4 172 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 SNX9Q9Y5X1 595 aa9.47□□□□□ -0.89
RBFOX1-203ENST00000355637 A0A087WZG4 1122 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 FAM196BA6NMK8 535 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 ACADVLP49748 655 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 FKBP4Q02790 459 aaKnown RBP eCLIP9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 NIPAL4Q0D2K0 466 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 GCKRQ14397 625 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 PHKG1Q16816 387 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 CDONQ4KMG0 1287 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 DCAF6Q58WW2 860 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 SLC9C2Q5TAH2 1124 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 SPOPLQ6IQ16 392 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 TAS2R42Q7RTR8 314 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 CROCCP3Q8IVE0 287 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 ELMOD2Q8IZ81 293 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 ENDOVQ8N8Q3 282 aaKnown RBP9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 PIP4K2CQ8TBX8 421 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 PLGRKTQ9HBL7 147 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 OLFML3Q9NRN5 406 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF330Q9Y3S2 320 aaPredicted RBP9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.89
RBFOX1-203ENST00000355637 LRRC72A6NJI9 287 aa9.46□□□□□ -0.9
RBFOX1-203ENST00000355637 SIGLEC16A6NMB1 481 aa9.46□□□□□ -0.9
RBFOX1-203ENST00000355637 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
RBFOX1-203ENST00000355637 FOXN1O15353 648 aa9.46□□□□□ -0.9
RBFOX1-203ENST00000355637 CBX6O95503 412 aa9.46□□□□□ -0.9
RBFOX1-203ENST00000355637 FUCA1P04066 466 aa9.46□□□□□ -0.9
RBFOX1-203ENST00000355637 CPA3P15088 417 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms