RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 RAVER2Q9HCJ3 691 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 ADGRA2Q96PE1 1338 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 COL17A1Q9UMD9 1497 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 NFIBO00712 420 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 MLNP12872 115 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 SLC16A1P53985 500 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 TUBGCP3Q96CW5 907 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 NSMCE4AQ9NXX6 385 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 CEP72Q9P209 647 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 FTLP02792 175 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 LINC00301Q8NCQ3 95 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 WRNIP1Q96S55 665 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 WNT8AQ9H1J5 351 aa6.1□□□□□ -1.43
SRGAP1-201ENST00000355086 TAP1Q03518 808 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 GFPT1Q06210 699 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 CCDC15Q0P6D6 951 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KCNH2Q12809 1159 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ARHGEF7Q14155 803 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TRAF7Q6Q0C0 670 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TRIM48Q8IWZ4 208 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ZNF280CQ8ND82 737 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SHCBP1Q8NEM2 672 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 RBAKQ9NYW8 714 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SPASTQ9UBP0 616 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ZFATQ9P243 1243 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 BLOC1S6Q9UL45 172 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TK2O00142 265 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PRPF3O43395 683 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 VSTM4Q8IW00 320 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PCYOX1LQ8NBM8 494 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SPATA33Q96N06 139 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 COA1Q9GZY4 146 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KCNQ3O43525 872 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 MAP4K1Q92918 833 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 RPAP3Q9H6T3 665 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SH3GLB2Q9NR46 395 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PRG3Q9Y2Y8 225 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 CFAP73A6NFT4 308 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 LAMB3Q13751 1172 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SNRNP48Q6IEG0 339 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ERAP2Q6P179 960 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TTLL6Q8N841 843 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 USP44Q9H0E7 712 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KCNN4O15554 427 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TRAPPC3O43617 180 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 CLCN6P51797 869 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 RAB14P61106 215 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PKP1Q13835 747 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 LRRC14Q15048 493 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ZNF772Q68DY9 489 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 VMP1Q96GC9 406 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 LSM7Q9UK45 103 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 GMNCA6NCL1 334 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PSMD3O43242 534 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 AKAP10O43572 662 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 STAT3P40763 770 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 OSBPL1AQ9BXW6 950 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ABHD10Q9NUJ1 306 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 FBXO40Q9UH90 709 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ERBB4Q15303 1308 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ALDH1A2O94788 518 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KCNJ6P48051 423 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TP53BP2Q13625 1128 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SNX31Q8N9S9 440 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SMAD5Q99717 465 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 POLE3Q9NRF9 147 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ITSN2Q9NZM3 1697 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TRAPPC8Q9Y2L5 1435 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 MFAP3LO75121 409 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 APRTP07741 180 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 EPB42P16452 691 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 IL6STP40189 918 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 HIC1Q14526 733 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 TRIM71Q2Q1W2 868 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KRT77Q7Z794 578 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 BBS7Q8IWZ6 715 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 FAM167BQ9BTA0 163 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PRRG1O14668 218 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 DMTNQ08495 405 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 IL31Q6EBC2 164 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SNF8Q96H20 258 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 MRPS26Q9BYN8 205 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 PLEKHA5Q9HAU0 1116 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SOX13Q9UN79 622 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SSTR3P32745 418 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 RANBP1P43487 201 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KRT84Q9NSB2 600 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ENO1P06733 434 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 FCER1AP12319 257 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 BRAFP15056 766 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ENOSF1Q7L5Y1 443 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 OR6J1Q8NGC5 347 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 COPRSQ9NQ92 184 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 MYO1CO00159 1063 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SEPT3Q9UH03 358 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KIF28PB7ZC32 967 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 NDUFB5O43674 189 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 CSE1LP55060 971 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 MFSD4BQ5TF39 518 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms