RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 FAM49BQ9NUQ9 324 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 CEP72Q9P209 647 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 COL14A1Q05707 1796 aaKnown RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 BCL9LQ86UU0 1499 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 ODC1P11926 461 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
GABPA-201ENST00000354828 SHC4Q6S5L8 630 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 NKX2-3Q8TAU0 364 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 N4BP2L2Q92802 583 aaPredicted RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 CHMP6Q96FZ7 201 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 FSD1LQ9BXM9 530 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 FBXO2Q9UK22 296 aaPredicted RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 FAN1Q9Y2M0 1017 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 ALDH2P05091 517 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 TFDP2Q14188 446 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 TAF2Q6P1X5 1199 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 TMEM199Q8N511 208 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 POLR3CQ9BUI4 534 aaPredicted RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 DHX35Q9H5Z1 703 aaKnown RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 SYNDIG1Q9H7V2 258 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 A0A087WZ62 844 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 ATP1A3P13637 1013 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 RIOX2Q8IUF8 465 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 KSR1Q8IVT5 923 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 RUNDC3BQ96NL0 473 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 APBA2Q99767 749 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 FDXACB1Q9BRP7 624 aaPredicted RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 DPP7Q9UHL4 492 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 SLC26A4O43511 780 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 SLC37A4O43826 429 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 PPFIA4O75335 1185 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 CA4P22748 312 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GNL1P36915 607 aaPredicted RBP10.34□□□□□ -0.75
GABPA-201ENST00000354828 PNPLA4P41247 253 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 TMEM132BQ14DG7 1078 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 IQCB1Q15051 598 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 STILQ15468 1287 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 ALKBH8Q96BT7 664 aaKnown RBP10.34□□□□□ -0.75
GABPA-201ENST00000354828 KLRG1Q96E93 195 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 IGFLR1Q9H665 355 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 ENC1O14682 589 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 WHAMMP3Q1A5X7 153 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 FAM76AQ8TAV0 307 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 CD99L2Q8TCZ2 262 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 HDAC11Q96DB2 347 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 CFAP57Q96MR6 1250 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GDAP1L1Q96MZ0 367 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
GABPA-201ENST00000354828 GPRC5CQ9NQ84 441 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 VPS18Q9P253 973 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GAKO14976 1311 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 TCRBV5S4A2TA0A5A2 114 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 MYMKA6NI61 221 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 EFCAB8A8MWE9 144 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 RWDD2BP57060 319 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 IKBKEQ14164 716 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GJC2Q5T442 439 aaPredicted RBP10.34□□□□□ -0.75
GABPA-201ENST00000354828 FRMD5Q7Z6J6 570 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 CCDC170Q8IYT3 715 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 HPDLQ96IR7 371 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 PCDHA13Q9Y5I0 950 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 MAP3K7O43318 606 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 CSDE1O75534 798 aaKnown RBP10.34□□□□□ -0.75
GABPA-201ENST00000354828 INHBAP08476 426 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GRK4P32298 578 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 GPC5P78333 572 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 ZNF235Q14590 738 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 SEZ6Q53EL9 994 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 LRRC8AQ8IWT6 810 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 HASPINQ8TF76 798 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 CPB2Q96IY4 423 aa10.34□□□□□ -0.75
GABPA-201ENST00000354828 AGO4Q9HCK5 861 aaKnown RBP10.34□□□□□ -0.75
GABPA-201ENST00000354828 LGALS16A8MUM7 142 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 FOXN1O15353 648 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 EXTL3O43909 919 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 ECEL1O95672 775 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 THP07101 528 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.76
GABPA-201ENST00000354828 TRIP13Q15645 432 aaPredicted RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 C17orf75Q9HAS0 396 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 NAGPAQ9UK23 515 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 TOMM70O94826 608 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 ELNP15502 786 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 CTXN3Q4LDR2 81 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 TDRD10Q5VZ19 366 aaKnown RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 NECAB2Q7Z6G3 386 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 ANKRD42Q8N9B4 389 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 MRPS31Q92665 395 aaKnown RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 PLCB1Q9NQ66 1216 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 ZRANB2O95218 330 aaKnown RBP eCLIP10.33□□□□□ -0.76
GABPA-201ENST00000354828 ITGB3P05106 788 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 SULT1E1P49888 294 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 CCL23P55773 120 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 RHBDL3P58872 404 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 TRIM72Q6ZMU5 477 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms