RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
SCN8A-201ENST00000354534 TRIP10Q15642 601 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 AKAP4Q5JQC9 854 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 MIEF2Q96C03 454 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 ASIC4Q96FT7 647 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.06
SCN8A-201ENST00000354534 OCLNQ16625 522 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 MACC1Q6ZN28 852 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 DPP10Q8N608 796 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 SNX14Q9Y5W7 946 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 LSM1O15116 133 aaKnown RBP8.46□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF862O60290 1169 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 LCA5LO95447 670 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 FGGP02679 453 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 CHRNA3P32297 505 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 TYW3Q6IPR3 259 aaKnown RBP8.46□□□□□ -1.06
SCN8A-201ENST00000354534 EMBQ6PCB8 327 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 TERB1Q8NA31 727 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 NDUFB9Q9Y6M9 179 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 YWHAQP27348 245 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 HSPA2P54652 639 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 LLGL2Q6P1M3 1020 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 PCYOX1LQ8NBM8 494 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 CUEDC2Q9H467 287 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 PSD3Q9NYI0 1048 aa8.46□□□□□ -1.06
SCN8A-201ENST00000354534 KIF21AQ7Z4S6 1674 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 SYCP2Q9BX26 1530 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 OSTNP61366 133 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 VSNL1P62760 191 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 GPS1Q13098 491 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 OLFML2AQ68BL7 652 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 FBXO38Q6PIJ6 1188 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ADCK2Q7Z695 626 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 NGRNQ9NPE2 291 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 MEI1Q5TIA1 1274 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 DGKHQ86XP1 1220 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 SYTL1Q8IYJ3 562 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 PLXNC1O60486 1568 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TAF5LO75529 589 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC130P13994 396 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ATN1P54259 1190 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 KIZQ2M2Z5 673 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 OR6P1Q8NGX9 317 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TYK2P29597 1187 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 POU5F1Q01860 360 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 POTEAQ6S8J7 498 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TIMM10P62072 90 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 OTUD4Q01804 1114 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 AASDHQ4L235 1098 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ZBTB33Q86T24 672 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 USP33Q8TEY7 942 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ELMO2Q96JJ3 720 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 EPS8L2Q9H6S3 715 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 KMT5AQ9NQR1 393 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 CYP26B1Q9NR63 512 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ALOX12P18054 663 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 MAGEA10P43363 369 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 NUP107P57740 925 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 FBXO42Q6P3S6 717 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 YWHAZP63104 245 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 POLA2Q14181 598 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TRADDQ15628 312 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 FAM160B1Q5W0V3 765 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 NAIF1Q69YI7 327 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 COLGALT2Q8IYK4 626 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 FAM129AQ9BZQ8 928 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 VTA1Q9NP79 307 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 H7C0S8 307 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 AGRPO00253 132 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 RALGDSQ12967 914 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 KPNB1Q14974 876 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 CACTIN-AS1Q8N1I8 211 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TBC1D19Q8N5T2 526 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 FAM172AQ8WUF8 416 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 MRPL48Q96GC5 212 aaKnown RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 HEMGNQ9BXL5 484 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 C6orf62Q9GZU0 229 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ATAD3AQ9NVI7 634 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 PCDH11XQ9BZA7 1347 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 INO80B-WBP1J3KQ70 363 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 SEC24BO95487 1268 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ALAS1P13196 640 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 ZSCAN20P17040 1043 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 TFDP1Q14186 410 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 LMBRD2Q68DH5 695 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 KIAA0825Q8IV33 1275 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 CLIC6Q96NY7 704 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 INO80BQ9C086 356 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-201ENST00000354534 RIMS2Q9UQ26 1411 aa8.45□□□□□ -1.06
SCN8A-201ENST00000354534 GSTM1P09488 218 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms