RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 AMFRQ9UKV5 643 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 ERICH4A6NGS2 130 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 K7ERI5 159 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 MARCKSL1P49006 195 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 MFAP3P55082 362 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 MOGSQ13724 837 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 ADAT2Q7Z6V5 191 aaKnown RBP16.76■□□□□ 0.27
MBD1-205ENST00000353909 SYCE1Q8N0S2 351 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 CASKIN2Q8WXE0 1202 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 ALG3Q92685 438 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 ZBTB10Q96DT7 871 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 VIPAS39Q9H9C1 493 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 GDF3Q9NR23 364 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 CTTNBP2NLQ9P2B4 639 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 TMEM110-MUSTN1A8MSY1 372 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
MBD1-205ENST00000353909 COPB2P35606 906 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 GPS2Q13227 327 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 TARBP2Q15633 366 aaKnown RBP16.76■□□□□ 0.27
MBD1-205ENST00000353909 DEPTORQ8TB45 409 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
MBD1-205ENST00000353909 BTBD6Q96KE9 485 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.76■□□□□ 0.277e-7■■□□□ 13.3
MBD1-205ENST00000353909 NIFKQ9BYG3 293 aaKnown RBP16.76■□□□□ 0.27
MBD1-205ENST00000353909 PRDM4Q9UKN5 801 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 DAAM1Q9Y4D1 1078 aa16.76■□□□□ 0.27
MBD1-205ENST00000353909 SPDYE5A6NIY4 337 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 CES2O00748 559 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 HARSP12081 509 aaKnown RBP16.75■□□□□ 0.27
MBD1-205ENST00000353909 TNNI1P19237 187 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 CAPSQ13938 189 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 GLE1Q53GS7 698 aaKnown RBP16.75■□□□□ 0.27
MBD1-205ENST00000353909 WDR78Q5VTH9 848 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 FMNL3Q8IVF7 1028 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 PSPC1Q8WXF1 523 aaKnown RBP16.75■□□□□ 0.27
MBD1-205ENST00000353909 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.75■□□□□ 0.27
MBD1-205ENST00000353909 AGO2Q9UKV8 859 aaKnown RBP16.75■□□□□ 0.27
MBD1-205ENST00000353909 ALG6Q9Y672 507 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 EXTL3O43909 919 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 STRN3Q13033 797 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
MBD1-205ENST00000353909 DDX1Q92499 740 aaKnown RBP16.75■□□□□ 0.27
MBD1-205ENST00000353909 KRT35Q92764 455 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 COPS5Q92905 334 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 OPTNQ96CV9 577 aa16.75■□□□□ 0.27
MBD1-205ENST00000353909 KRIT1O00522 736 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
MBD1-205ENST00000353909 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 FGGP02679 453 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 KRT5P13647 590 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 NAMPTP43490 491 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.27
MBD1-205ENST00000353909 HSP90B2PQ58FF3 399 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
MBD1-205ENST00000353909 FBXO16Q8IX29 292 aaPredicted RBP16.74■□□□□ 0.27
MBD1-205ENST00000353909 RASGEF1CQ8N431 466 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 SYT17Q9BSW7 474 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 AMACRQ9UHK6 382 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 RTN2O75298 545 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 CYP2C19P33261 490 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 GUCY2FP51841 1108 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 ERVK-9P63128 1117 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 METTL7BQ6UX53 244 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 PRPF31Q8WWY3 499 aaKnown RBP16.74■□□□□ 0.27
MBD1-205ENST00000353909 AGTPBP1Q9UPW5 1226 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 RNF40O75150 1001 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 VNN1O95497 513 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 GJB1P08034 283 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 EPHB4P54760 987 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 TNNC1P63316 161 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 GPC5P78333 572 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
MBD1-205ENST00000353909 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 LRRC71Q8N4P6 559 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 TRAPPC12Q8WVT3 735 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 SEPT1Q8WYJ6 367 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 CELF4Q9BZC1 486 aaKnown RBP16.74■□□□□ 0.27
MBD1-205ENST00000353909 STYXL1Q9Y6J8 313 aa16.74■□□□□ 0.27
MBD1-205ENST00000353909 NEDD9Q14511 834 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 MESDQ14696 234 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 PHLDB2Q86SQ0 1253 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 OR5B17Q8NGF7 314 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 GLG1Q92896 1179 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 MSTO1Q9BUK6 570 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 PDGFCQ9NRA1 345 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 C4BPAP04003 597 aaKnown RBP16.73■□□□□ 0.27
MBD1-205ENST00000353909 GTF2H1P32780 548 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 GJA5P36382 358 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 CDR2Q01850 454 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 BIRC3Q13489 604 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 PSMD6Q15008 389 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 ZACNQ401N2 412 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 LLGL2Q6P1M3 1020 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 FAM71BQ8TC56 605 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 FNBP1Q96RU3 617 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms