RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 EIF3HO15372 352 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNF38-203ENST00000353739 ASAP2O43150 1006 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 MED7O43513 233 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 IL18RAPO95256 599 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 FGGP02679 453 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 KRT5P13647 590 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 CXCR5P32302 372 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 USP8P40818 1118 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 NSFP46459 744 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 CLDN10P78369 228 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 BAATQ14032 418 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 MXD4Q14582 209 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 CYP1B1Q16678 543 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 DENND2CQ68D51 928 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ABHD15Q6UXT9 468 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ZPBP2Q6X784 338 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 LBX2Q6XYB7 198 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 DAW1Q8N136 415 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 LMO3Q8TAP4 145 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 SLCO2A1Q92959 643 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 NUP85Q9BW27 656 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ROPN1BQ9BZX4 212 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 PCIF1Q9H4Z3 704 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ROPN1Q9HAT0 212 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 HOMER2Q9NSB8 354 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 FBXO28Q9NVF7 368 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PCDHB2Q9Y5E7 798 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PCDHA3Q9Y5H8 950 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 MAFBQ9Y5Q3 323 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 ECEL1O95672 775 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 GAS8O95995 478 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 HOXC6P09630 235 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 P4HA1P13674 534 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 CNGA1P29973 690 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 GCLMP48507 274 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 SNX16P57768 344 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ACTR2P61160 394 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 IER5Q5VY09 327 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PAXIP1Q6ZW49 1069 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 TRMT10CQ7L0Y3 403 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 WDR49Q8IV35 697 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PPM1KQ8N3J5 372 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PARD3BQ8TEW8 1205 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 UBLCP1Q8WVY7 318 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 ATG4CQ96DT6 458 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 RBM41Q96IZ5 413 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 MS4A14Q96JA4 679 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 FMO2Q99518 471 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 NCAPGQ9BPX3 1015 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PAGR1Q9BTK6 254 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 MRPL4Q9BYD3 311 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 PORCNQ9H237 461 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 CYP39A1Q9NYL5 469 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 WHRNQ9P202 907 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ARHGAP28Q9P2N2 729 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 WRAP73Q9P2S5 460 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 IP6K2Q9UHH9 426 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 SALL4Q9UJQ4 1053 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 STRIP2Q9ULQ0 834 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PLAAQ9Y263 795 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 GJA3Q9Y6H8 435 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 SMAPO00193 183 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 BUB1BO60566 1050 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 PPFIA2O75334 1257 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 CYP11B1P15538 503 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 NR1D1P20393 614 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 COPS2P61201 443 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 SLC7A5Q01650 507 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PRPF4BQ13523 1007 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 C6orf118Q5T5N4 469 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PHLDB3Q6NSJ2 640 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ARHGEF19Q8IW93 802 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 IPO4Q8TEX9 1081 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 CENPTQ96BT3 561 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ZIM3Q96PE6 472 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 UIMC1Q96RL1 719 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ERP44Q9BS26 406 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 THAP2Q9H0W7 228 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ST7Q9NRC1 585 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 NOCTQ9UK39 431 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 AGO2Q9UKV8 859 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 COL1A2P08123 1366 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 FOXN3O00409 490 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 PHACTR2O75167 634 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 TNNC2P02585 160 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ERCC3P19447 782 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ABCB4P21439 1286 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 MAPK4P31152 587 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 GNGT1P63211 74 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 MAP2K1Q02750 393 aaPredicted RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 C1QBPQ07021 282 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 SPP2Q13103 211 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 ODF2Q5BJF6 829 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 SWSAP1Q6NVH7 229 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 IL31RAQ8NI17 732 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 EPS8L1Q8TE68 723 aa3.99□□□□□ -1.77
RNF38-203ENST00000353739 PSPC1Q8WXF1 523 aaKnown RBP3.99□□□□□ -1.77
RNF38-203ENST00000353739 PPM1EQ8WY54 764 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms