RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PDE12Q6L8Q7 609 aaKnown RBP24.21■■□□□ 1.47
SNX3-202ENST00000349379 STAMQ92783 540 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 TMEM169Q96HH4 297 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 FAM193BQ96PV7 902 aaPredicted RBP24.21■■□□□ 1.47
SNX3-202ENST00000349379 RPS6KC1Q96S38 1066 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 PYM1Q9BRP8 204 aaKnown RBP24.21■■□□□ 1.47
SNX3-202ENST00000349379 LRRC27Q9C0I9 530 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 HAPLN2Q9GZV7 340 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 PUF60Q9UHX1 559 aaKnown RBP24.21■■□□□ 1.47
SNX3-202ENST00000349379 KCNH3Q9ULD8 1083 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 HPSEQ9Y251 543 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 GDAQ9Y2T3 454 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 FAM237AA0A1B0GTK4 181 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 NRP1O14786 923 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 NOLC1Q14978 699 aaKnown RBP eCLIP24.2■■□□□ 1.46
SNX3-202ENST00000349379 XKR4Q5GH76 650 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 HVCN1Q96D96 273 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 MARCH5Q9NX47 278 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 COG5Q9UP83 839 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 PCDHGC5Q9Y5F6 944 aa24.2■■□□□ 1.46
SNX3-202ENST00000349379 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.19■■□□□ 1.46
SNX3-202ENST00000349379 CSPG5O95196 566 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 ALDH2P05091 517 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 AMPD3Q01432 767 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 HYAL1Q12794 435 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 SKIV2LQ15477 1246 aaKnown RBP24.19■■□□□ 1.46
SNX3-202ENST00000349379 ZC2HC1CQ53FD0 456 aaPredicted RBP24.19■■□□□ 1.46
SNX3-202ENST00000349379 SLC39A4Q6P5W5 647 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 ALKAL1Q6UXT8 129 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 ADGRD2Q7Z7M1 963 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 ZBTB33Q86T24 672 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 DDX53Q86TM3 631 aaKnown RBP24.19■■□□□ 1.46
SNX3-202ENST00000349379 C7orf25Q9BPX7 421 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 TCHPQ9BT92 498 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 CCDC94Q9BW85 323 aaPredicted RBP24.19■■□□□ 1.46
SNX3-202ENST00000349379 VN1R3Q9BXE9 311 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 PANK4Q9NVE7 773 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 FAN1Q9Y2M0 1017 aa24.19■■□□□ 1.46
SNX3-202ENST00000349379 A0A1W2PQ27 194 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 A0A1W2PQ64 194 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 A0A1W2PQD8 194 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 CLDN3O15551 220 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 EFEMP2O95967 443 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 IDEP14735 1019 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 PFKFB1P16118 471 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 CTC1Q2NKJ3 1217 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 ATXN2LQ8WWM7 1075 aaKnown RBP24.18■■□□□ 1.46
SNX3-202ENST00000349379 ZBP1Q9H171 429 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 NGRNQ9NPE2 291 aaKnown RBP24.18■■□□□ 1.46
SNX3-202ENST00000349379 ANKFY1Q9P2R3 1169 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 VWA8A3KMH1 1905 aa24.18■■□□□ 1.46
SNX3-202ENST00000349379 HNRNPDLO14979 420 aaKnown RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 MEFVO15553 781 aaPredicted RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 ACTN4O43707 911 aaKnown RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 FAM189A1O60320 539 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 THP07101 528 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 LIG4P49917 911 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 TUSC3Q13454 348 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 HERC4Q5GLZ8 1057 aaPredicted RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 CCDC65Q8IXS2 484 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 RNF168Q8IYW5 571 aaPredicted RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 HLA-CQ95604 372 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 PABPC5Q96DU9 382 aaKnown RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 BICD1Q96G01 975 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 SNX27Q96L92 541 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 PPP1R10Q96QC0 940 aaKnown RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 TCF25Q9BQ70 676 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 MRPL44Q9H9J2 332 aaKnown RBP24.17■■□□□ 1.46
SNX3-202ENST00000349379 GDPD2Q9HCC8 539 aa24.17■■□□□ 1.46
SNX3-202ENST00000349379 TCF20Q9UGU0 1960 aaKnown RBP24.16■■□□□ 1.46
SNX3-202ENST00000349379 A0A1B0GVL5 298 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 NCK2O43639 380 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 SLFN14P0C7P3 912 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 OR1G1P47890 313 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 COASYQ13057 564 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 PPP2R3CQ969Q6 453 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 ACAP3Q96P50 834 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 FGFBP2Q9BYJ0 223 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 UBE2ZQ9H832 354 aaPredicted RBP24.16■■□□□ 1.46
SNX3-202ENST00000349379 TOPORSQ9NS56 1045 aaPredicted RBP24.16■■□□□ 1.46
SNX3-202ENST00000349379 STK39Q9UEW8 545 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 SERTAD1Q9UHV2 236 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 CIZ1Q9ULV3 898 aaPredicted RBP24.16■■□□□ 1.46
SNX3-202ENST00000349379 STYXL1Q9Y6J8 313 aa24.16■■□□□ 1.46
SNX3-202ENST00000349379 A0A0B4J269 797 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 HARSP12081 509 aaKnown RBP24.15■■□□□ 1.46
SNX3-202ENST00000349379 GTF2F1P35269 517 aaKnown RBP eCLIP24.15■■□□□ 1.46
SNX3-202ENST00000349379 CASP5P51878 434 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 YARSP54577 528 aaKnown RBP24.15■■□□□ 1.46
SNX3-202ENST00000349379 OSTNP61366 133 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 EHHADHQ08426 723 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 ALCAMQ13740 583 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 PLPP4Q5VZY2 271 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 VPS52Q8N1B4 723 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 MICAL1Q8TDZ2 1067 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 ENTPD7Q9NQZ7 604 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 TBC1D7Q9P0N9 293 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 CNTN3Q9P232 1028 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 USP25Q9UHP3 1055 aa24.15■■□□□ 1.46
SNX3-202ENST00000349379 PRG3Q9Y2Y8 225 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms