RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L6PQ6QN14 398 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 ACAP3Q96P50 834 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 RERGLQ9H628 205 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 POLD4Q9HCU8 107 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 ARHGAP31Q2M1Z3 1444 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 TK2O00142 265 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 GRIN3BO60391 1043 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 AKIRIN2Q53H80 203 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 SP8Q8IXZ3 490 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 EXOSC4Q9NPD3 245 aaKnown RBP12.46□□□□□ -0.41
TRAF3-201ENST00000347662 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 GUCY1A3Q02108 690 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 MTMR1Q13613 665 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 PASD1Q8IV76 773 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 PDIK1LQ8N165 341 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 GOLGA8IPA6NC78 632 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 GOLGA8JA6NMD2 632 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 IL10P22301 178 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 SLFN12LQ6IEE8 588 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 GRAMD1CQ8IYS0 662 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 ECT2Q9H8V3 914 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 SAYSD1Q9NPB0 183 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 TBC1D4O60343 1298 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 TJP3O95049 919 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 RALBP11234 206 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 ALDH18A1P54886 795 aaKnown RBP12.46□□□□□ -0.41
TRAF3-201ENST00000347662 KIZQ2M2Z5 673 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 PRR5LQ6MZQ0 368 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 ERAP2Q6P179 960 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 POMGNT2Q8NAT1 580 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 MSTO1Q9BUK6 570 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 SIK2Q9H0K1 926 aa12.46□□□□□ -0.41
TRAF3-201ENST00000347662 SH2B2O14492 632 aaPredicted RBP12.46□□□□□ -0.42
TRAF3-201ENST00000347662 MTRF1O75570 445 aaKnown RBP12.46□□□□□ -0.42
TRAF3-201ENST00000347662 VEPH1Q14D04 833 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 CYTH1Q15438 398 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM154Q6P9G4 183 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 C11orf88Q6PI97 169 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 UXS1Q8NBZ7 420 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 MMP19Q99542 508 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 AP1M1Q9BXS5 423 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 PPP2R2CQ9Y2T4 447 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM191CA6NGB0 347 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 CHRNA3P32297 505 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 PEX3P56589 373 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 AP2B1P63010 937 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 DHX9Q08211 1270 aaKnown RBP12.46□□□□□ -0.42
TRAF3-201ENST00000347662 CUL4AQ13619 759 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.42
TRAF3-201ENST00000347662 SNX31Q8N9S9 440 aa12.46□□□□□ -0.42
TRAF3-201ENST00000347662 A0A087WUV0 522 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 TLR2O60603 784 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 SRGAP2O75044 1071 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FKBP9O95302 570 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FLT3P36888 993 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 MLH1P40692 756 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 SLC7A5Q01650 507 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 DYNC1I2Q13409 638 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FKBP9P1Q75LS8 142 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 NFIBO00712 420 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CYBBP04839 570 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 SERPINB4P48594 390 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 RUNX1T1Q06455 604 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 TAF1CQ15572 869 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 TLK2Q86UE8 772 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CLEC4FQ8N1N0 589 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CYGBQ8WWM9 190 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 SPATA16Q9BXB7 569 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FOXP1Q9H334 677 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 EML4Q9HC35 981 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 SYNCRIPO60506 623 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 IRF1P10914 325 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FCER1AP12319 257 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CBFBQ13951 182 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 ICE2Q659A1 982 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 PPP2R3CQ969Q6 453 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FAM81BQ96LP2 452 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 MYLK2Q9H1R3 596 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 F5H6K3 240 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 YWHAZP63104 245 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 KLRC3Q07444 240 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 HORMAD1Q86X24 394 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 EPN3Q9H201 632 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 NOVA2Q9UNW9 492 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 BAZ2BQ9UIF8 2168 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms