RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CKAP2Q8WWK9 683 aa17.01■□□□□ 0.31
HMGA1-202ENST00000347617 STK33Q9BYT3 514 aa17.01■□□□□ 0.31
HMGA1-202ENST00000347617 GGA3Q9NZ52 723 aa17.01■□□□□ 0.31
HMGA1-202ENST00000347617 PRKAG3Q9UGI9 489 aa17.01■□□□□ 0.31
HMGA1-202ENST00000347617 L3MBTL1Q9Y468 752 aa17.01■□□□□ 0.31
HMGA1-202ENST00000347617 PASKQ96RG2 1323 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 ANKRD62A6NC57 917 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 HIP1RO75146 1068 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 VCAM1P19320 739 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 CYP1B1Q16678 543 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 MCF2L2Q86YR7 1114 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 ART4Q93070 314 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 RPS6KC1Q96S38 1066 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 SLC38A10Q9HBR0 1119 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 SNX24Q9Y343 169 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 KLHL33A6NCF5 533 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 TCEA3O75764 348 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 FESP07332 822 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 RWDD2BP57060 319 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 PRPF4BQ13523 1007 aaKnown RBP17■□□□□ 0.31
HMGA1-202ENST00000347617 RBBP5Q15291 538 aaKnown RBP17■□□□□ 0.31
HMGA1-202ENST00000347617 ZYXQ15942 572 aaKnown RBP17■□□□□ 0.31
HMGA1-202ENST00000347617 ECM1Q16610 540 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 ANKRD20A2Q5SQ80 823 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 ANKRD20A1Q5TYW2 823 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 DCAF12L1Q5VU92 463 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 ANKRD20A3Q5VUR7 823 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 AGGF1Q8N302 714 aaeCLIP17■□□□□ 0.31
HMGA1-202ENST00000347617 MICAL1Q8TDZ2 1067 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 WRNIP1Q96S55 665 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
HMGA1-202ENST00000347617 RNF181Q9P0P0 153 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 GCNT4Q9P109 453 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 KLHL14Q9P2G3 628 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 FRMD4AQ9P2Q2 1039 aaPredicted RBP17■□□□□ 0.31
HMGA1-202ENST00000347617 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
HMGA1-202ENST00000347617 ZNF536O15090 1300 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 ANKRD33BA6NCL7 494 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 KRT13P13646 458 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 HSD17B4P51659 736 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 MRPS35P82673 323 aaKnown RBP16.99■□□□□ 0.31
HMGA1-202ENST00000347617 SPDYAQ5MJ70 313 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 SEL1L2Q5TEA6 688 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 LMNTD2Q8IXW0 634 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 PROCA1Q8NCQ7 364 aaPredicted RBP16.99■□□□□ 0.31
HMGA1-202ENST00000347617 ERMNQ8TAM6 284 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 LNX1Q8TBB1 728 aaPredicted RBP16.99■□□□□ 0.31
HMGA1-202ENST00000347617 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 SEMA4AQ9H3S1 761 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 LRRC4CQ9HCJ2 640 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 ZFATQ9P243 1243 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
HMGA1-202ENST00000347617 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
HMGA1-202ENST00000347617 EVI5O60447 810 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 DDNO94850 711 aaPredicted RBP16.98■□□□□ 0.31
HMGA1-202ENST00000347617 EYA4O95677 639 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 KRT16P08779 473 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 RPL21P46778 160 aaKnown RBP16.98■□□□□ 0.31
HMGA1-202ENST00000347617 SPP2Q13103 211 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 TAF11Q15544 211 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 SLC35C1Q96A29 364 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 TMEM237Q96Q45 408 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 MKNK1Q9BUB5 465 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 ADAM22Q9P0K1 906 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 TBC1D7Q9P0N9 293 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 LRRC42Q9Y546 428 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 ACTL7BQ9Y614 415 aa16.98■□□□□ 0.31
HMGA1-202ENST00000347617 GOLGB1Q14789 3259 aaKnown RBP16.97■□□□□ 0.31
HMGA1-202ENST00000347617 TCP11X1B4DZS4 312 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 ZBED4O75132 1171 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 NEFHP12036 1026 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 IFNAR2P48551 515 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 OAZ1P54368 228 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 SLC12A3P55017 1021 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 CAV1Q03135 178 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 PPP1R21Q6ZMI0 780 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 ARHGEF18Q6ZSZ5 1173 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 SYDE1Q6ZW31 735 aaPredicted RBP16.97■□□□□ 0.31
HMGA1-202ENST00000347617 EXOC3L1Q86VI1 746 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 C12orf50Q8NA57 414 aaPredicted RBP16.97■□□□□ 0.31
HMGA1-202ENST00000347617 EPS8L3Q8TE67 593 aaKnown RBP16.97■□□□□ 0.31
HMGA1-202ENST00000347617 ZC3H15Q8WU90 426 aaKnown RBP16.97■□□□□ 0.31
HMGA1-202ENST00000347617 INPP5DQ92835 1189 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 SLCO2A1Q92959 643 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 LENG9Q96B70 501 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 NAF1Q96HR8 494 aaKnown RBP16.97■□□□□ 0.31
HMGA1-202ENST00000347617 MAGEB18Q96M61 343 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 FGFBP2Q9BYJ0 223 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 WNT8AQ9H1J5 351 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 WHRNQ9P202 907 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 NR2E1Q9Y466 385 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 PCDHA3Q9Y5H8 950 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 E9PMD0 336 aa16.97■□□□□ 0.31
HMGA1-202ENST00000347617 ECM2O94769 699 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms