RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 RBM23Q86U06 439 aaKnown RBP15.12■□□□□ 0.01
TPM4-202ENST00000344824 DAW1Q8N136 415 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 TMEM169Q96HH4 297 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 RPS6KC1Q96S38 1066 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 GAD1Q99259 594 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 REEP2Q9BRK0 252 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 FZD8Q9H461 694 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 PDZD7Q9H5P4 517 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 UBE2ZQ9H832 354 aaPredicted RBP15.12■□□□□ 0.01
TPM4-202ENST00000344824 EXOC1Q9NV70 894 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 CLDND1Q9NY35 253 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 SPG21Q9NZD8 308 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 DNAJB4Q9UDY4 337 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 COG5Q9UP83 839 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 VCANP13611 3396 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 K7ERI5 159 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 KLRC4O43908 158 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 FAM13AO94988 1023 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 MYL1P05976 194 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 CCDC192P0DO97 292 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
TPM4-202ENST00000344824 KCNA5P22460 613 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 GUCY2CP25092 1073 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■■■□ 21.5
TPM4-202ENST00000344824 KCNQ1P51787 676 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
TPM4-202ENST00000344824 ZNF445P59923 1031 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 KRT17Q04695 432 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 GIT2Q14161 759 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 AAK1Q2M2I8 961 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 EEF1DP3Q658K8 133 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 ATXN2LQ8WWM7 1075 aaKnown RBP15.11■□□□□ 0.01
TPM4-202ENST00000344824 CCDC47Q96A33 483 aaKnown RBP15.11■□□□□ 0.01
TPM4-202ENST00000344824 DNAJC19Q96DA6 116 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 TIPINQ9BVW5 301 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 PANK4Q9NVE7 773 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 KLK14Q9P0G3 267 aa15.11■□□□□ 0.01
TPM4-202ENST00000344824 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
TPM4-202ENST00000344824 PDCD11Q14690 1871 aaKnown RBP15.11■□□□□ 0.01
TPM4-202ENST00000344824 A0A1B0GUA9 196 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 ACKR2O00590 384 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 TBCAO75347 108 aaKnown RBP15.1■□□□□ 0.01
TPM4-202ENST00000344824 NLRP12P59046 1061 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 UBE3AQ05086 875 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 COASYQ13057 564 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 CAMK1Q14012 370 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 STX1AQ16623 288 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 FAM187BQ17R55 369 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 POTEHQ6S545 545 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 UNC13DQ70J99 1090 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 TMC7Q7Z402 723 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 ZNF280BQ86YH2 543 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 CCDC65Q8IXS2 484 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 SLC39A11Q8N1S5 342 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 RSPH1Q8WYR4 309 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 HPS3Q969F9 1004 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 ASB2Q96Q27 587 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 GSDMAQ96QA5 445 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 TCF25Q9BQ70 676 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 FUCA2Q9BTY2 467 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 TSPY26PQ9H489 355 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 RMND1Q9NWS8 449 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 GDAQ9Y2T3 454 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 PRG3Q9Y2Y8 225 aaPredicted RBP15.1■□□□□ 0.01
TPM4-202ENST00000344824 TTC28Q96AY4 2481 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 NCOR1O75376 2440 aa15.1■□□□□ 0.01
TPM4-202ENST00000344824 ARL5CA6NH57 179 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 H3BQ06 376 aaPredicted RBP15.09■□□□□ 0.01
TPM4-202ENST00000344824 K7ENM7 598 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 B4GALT3O60512 393 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 PLS3P13797 630 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 MATR3P43243 847 aaKnown RBP eCLIP15.09■□□□□ 0.01
TPM4-202ENST00000344824 OR1G1P47890 313 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 NRIP1P48552 1158 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 SLC11A1P49279 550 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 SMTNP53814 917 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 ERVFC1P60507 584 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 STRN3Q13033 797 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 CLUL1Q15846 466 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 DCAF4L1Q3SXM0 396 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 ZNF568Q3ZCX4 644 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 NT5DC1Q5TFE4 455 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 ZBTB33Q86T24 672 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 TMEM173Q86WV6 379 aaPredicted RBP15.09■□□□□ 0.01
TPM4-202ENST00000344824 SMYD4Q8IYR2 804 aaPredicted RBP15.09■□□□□ 0.01
TPM4-202ENST00000344824 SPATA20Q8TB22 786 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 BICD1Q96G01 975 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 DNAJC25Q9H1X3 360 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 ANO10Q9NW15 660 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 SNTG2Q9NY99 539 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 KCND2Q9NZV8 630 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 TBC1D7Q9P0N9 293 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 DLL1O00548 723 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 DDHD2O94830 711 aa15.09■□□□□ 0.01
TPM4-202ENST00000344824 NDUFV1P49821 464 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms