RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 LUC7L2Q9Y383 392 aaKnown RBP13.78□□□□□ -0.2
CT55-202ENST00000344129 SKILP12757 684 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
CT55-202ENST00000344129 THPOP40225 353 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 LBX1P52954 281 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 PSMD6Q15008 389 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
CT55-202ENST00000344129 RSPH3Q86UC2 560 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 CNGA4Q8IV77 575 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 TRPV6Q9H1D0 765 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 NLRC4Q9NPP4 1024 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
CT55-202ENST00000344129 M0QZ92 97 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 LRRN2O75325 713 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 MXI1P50539 228 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 POLR2FP61218 127 aaKnown RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 DPY19L2P1Q6NXN4 242 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 GJB7Q6PEY0 223 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 BRSK2Q8IWQ3 736 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 C17orf53Q8N3J3 647 aaPredicted RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 DHX38Q92620 1227 aaKnown RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 INTS2Q9H0H0 1204 aaKnown RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 GANQ9H2C0 597 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 ABHD10Q9NUJ1 306 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
CT55-202ENST00000344129 PTPRJQ12913 1337 aa13.77□□□□□ -0.21
CT55-202ENST00000344129 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 GTPBP10A4D1E9 387 aaKnown RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 STX10O60499 249 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 NPTXRO95502 500 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 CHRNA1P02708 482 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 MCF2P10911 925 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 TNNI1P19237 187 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 MCCD1P59942 119 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 KLHDC7AQ5VTJ3 777 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 CACNA2D4Q7Z3S7 1137 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 ZSCAN30Q86W11 494 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 PANX2Q96RD6 677 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 TMEM8AQ9HCN3 771 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 PIN4Q9Y237 131 aaKnown RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 A0A1W2PQJ5 194 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 DNM1LO00429 736 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 B4GALT4O60513 344 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 N4BP1O75113 896 aaKnown RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 STAG3L1P0CL83 205 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 CXCL8P10145 99 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 ZBED6P86452 979 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 PTPN11Q06124 597 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 NCBP1Q09161 790 aaKnown RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 MGAT3Q09327 533 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 KRT39Q6A163 491 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 TRIM65Q6PJ69 517 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 USP37Q86T82 979 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 BAP1Q92560 729 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 ELMO3Q96BJ8 720 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 CGRRF1Q99675 332 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 OSBPL7Q9BZF2 842 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 SENP6Q9GZR1 1112 aaPredicted RBP13.76□□□□□ -0.21
CT55-202ENST00000344129 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 FHOD1Q9Y613 1164 aa13.76□□□□□ -0.21
CT55-202ENST00000344129 LRRC53A6NM62 1247 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 HSPA1AP0DMV8 641 aaKnown RBP13.75□□□□□ -0.21
CT55-202ENST00000344129 HSPA1BP0DMV9 641 aaKnown RBP13.75□□□□□ -0.21
CT55-202ENST00000344129 PTK7Q13308 1070 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 HSP90AA2PQ14568 343 aaPredicted RBP13.75□□□□□ -0.21
CT55-202ENST00000344129 NOTUMQ6P988 496 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
CT55-202ENST00000344129 SV2AQ7L0J3 742 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 SLC43A3Q8NBI5 491 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
CT55-202ENST00000344129 OR5B17Q8NGF7 314 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 OR8K1Q8NGG5 319 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 LMO3Q8TAP4 145 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 TAS1R2Q8TE23 839 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
CT55-202ENST00000344129 RPF1Q9H9Y2 349 aaKnown RBP13.75□□□□□ -0.21
CT55-202ENST00000344129 CEP72Q9P209 647 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms