RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZC3H11AO75152 810 aaKnown RBP eCLIP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NR1I2O75469 434 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 DDHD2O94830 711 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 POMCP01189 267 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SCNN1GP51170 649 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 YARSP54577 528 aaKnown RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ASIC1P78348 528 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZNF280BQ86YH2 543 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FSIP1Q8NA03 581 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 POF1BQ8WVV4 589 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 STAMQ92783 540 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PAGE5Q96GU1 130 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 IGSF21Q96ID5 467 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ACAP3Q96P50 834 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 RPS6KC1Q96S38 1066 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TSPAN18Q96SJ8 248 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 APOL6Q9BWW8 343 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TMEM206Q9H813 350 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ALG13Q9NP73 1137 aaKnown RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GOLGA6L4A6NEF3 574 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PTGESO14684 152 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NCK2O43639 380 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 THP07101 528 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 POSTNQ15063 836 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZC2HC1CQ53FD0 456 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 KANK3Q6NY19 840 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 DDX53Q86TM3 631 aaKnown RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TMEM169Q96HH4 297 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZBTB45Q96K62 511 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NSUN3Q9H649 340 aaKnown RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PLEKHA5Q9HAU0 1116 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NGRNQ9NPE2 291 aaKnown RBP14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TLR9Q9NR96 1032 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 MIOSQ9NXC5 875 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ANKFY1Q9P2R3 1169 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 DNAJB4Q9UDY4 337 aa14.3□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COL6A3P12111 3177 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FSD2A1L4K1 749 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FSCN2O14926 492 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 OGTO15294 1046 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FAM189A1O60320 539 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GCNT3O95395 438 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ADRB2P07550 413 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CLTAP09496 248 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 KCNE1P15382 129 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 DNAJB1P25685 340 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SLC11A1P49279 550 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TUSC3Q13454 348 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COL19A1Q14993 1142 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NAB2Q15742 525 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SLC39A4Q6P5W5 647 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CEP120Q8N960 986 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TMEM87AQ8NBN3 555 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SNX27Q96L92 541 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 IPO9Q96P70 1041 aaKnown RBP14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 HAPLN2Q9GZV7 340 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GDAQ9Y2T3 454 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 UBE4BO95155 1302 aa14.29□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NRP1O14786 923 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 B4GALT3O60512 393 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZNF202O95125 648 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 EFEMP2O95967 443 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 AFMP43652 599 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SNRPFP62306 86 aaKnown RBP14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PSMD2Q13200 908 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CUL4BQ13620 913 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 BMS1Q14692 1282 aaKnown RBP14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FAM26FQ5R3K3 315 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 EPM2AIP1Q7L775 607 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZBTB33Q86T24 672 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FMR1NBQ8N0W7 255 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 UROC1Q96N76 676 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GBP3Q9H0R5 595 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SLC38A7Q9NVC3 462 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 KLK14Q9P0G3 267 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 IRAK3Q9Y616 596 aa14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 KIAA0391O15091 583 aaKnown RBP14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 MYBP10242 640 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GARTP22102 1010 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PBX3P40426 434 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CASP5P51878 434 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CD302Q8IX05 232 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ELOA2Q8IYF1 753 aaPredicted RBP14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GPR65Q8IYL9 337 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ENGASEQ8NFI3 743 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZNF507Q8TCN5 953 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms