RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 OLFM3Q96PB7 478 aa13.3□□□□□ -0.28
SSX2IP-201ENST00000342203 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
SSX2IP-201ENST00000342203 PFASO15067 1338 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 LOC100653049A0A140TA62 436 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 TCRBV5S4A2TA0A5A2 114 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 SUPT3HO75486 399 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 KRT34O76011 436 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 ESRRGP62508 458 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 DCLRE1BQ9H816 532 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 APOBEC2Q9Y235 224 aaKnown RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 ZBED4O75132 1171 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 AKAP3O75969 853 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 PTENP60484 403 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 PHEXP78562 749 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 XAB2Q9HCS7 855 aaKnown RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 KMT5AQ9NQR1 393 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 USP32Q8NFA0 1604 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 RTN2O75298 545 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 ENTPD5O75356 428 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 GGPS1O95749 300 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 AKR1B1P15121 316 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 TMEM270Q6UE05 265 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 SCARA5Q6ZMJ2 495 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 MREGQ8N565 214 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 NMD3Q96D46 503 aaKnown RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 TTC25Q96NG3 672 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 ACAP3Q96P50 834 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 NXF1Q9UBU9 619 aaKnown RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 RIPK2O43353 540 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 CYP19A1P11511 503 aaPredicted RBP13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 KRT4P19013 534 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 CYP11B2P19099 503 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 ICA1LQ8NDH6 482 aa13.29□□□□□ -0.28
SSX2IP-201ENST00000342203 KCTD6Q8NC69 237 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 EIF2AK1Q9BQI3 630 aaKnown RBP13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 THEGQ9P2T0 379 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 ATP4AP20648 1035 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 NEUROG2Q9H2A3 272 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 SMG5Q9UPR3 1016 aaKnown RBP13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 NAALADL1Q9UQQ1 740 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 IPO5O00410 1097 aaKnown RBP13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 XRCC4Q13426 336 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 HIF1AQ16665 826 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 BAP1Q92560 729 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 HSPH1Q92598 858 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.282e-11■■■■■ 33.1
SSX2IP-201ENST00000342203 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 PADI6Q6TGC4 694 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 RANBP17Q9H2T7 1088 aaKnown RBP13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 MAD2L2Q9UI95 211 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 SYNJ2BP-COX16A0A087WUM0 186 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 CDO1Q16878 200 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 RHOT1Q8IXI2 618 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 SLC25A41Q8N5S1 370 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 NSL1Q96IY1 281 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 COX16Q9P0S2 106 aa13.28□□□□□ -0.28
SSX2IP-201ENST00000342203 RALAP11233 206 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 HIC1Q14526 733 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 TMEM259Q4ZIN3 620 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 ARMC3Q5W041 872 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 PPP1R36Q96LQ0 422 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 DDX50Q9BQ39 737 aaKnown RBP13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 PIK3C2BO00750 1634 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 MAGEA13PA6NCF6 341 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 CALB2P22676 271 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 ABCB5Q2M3G0 1257 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 MYLK2Q9H1R3 596 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 TACC3Q9Y6A5 838 aa13.27□□□□□ -0.28
SSX2IP-201ENST00000342203 FOXP2O15409 715 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 GPC4O75487 556 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 RASSF9O75901 435 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 YY1P25490 414 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 ART3Q13508 389 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 ANO5Q75V66 913 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 PDZD8Q8NEN9 1154 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms