RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ZIM3Q96PE6 472 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 AGPAT1Q99943 283 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 SEPT11Q9NVA2 429 aaKnown RBP16.2■□□□□ 0.18
TPM3-208ENST00000341485 AMFRQ9UKV5 643 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 ABT1Q9ULW3 272 aaKnown RBP16.2■□□□□ 0.18
TPM3-208ENST00000341485 BHMG1C9JSJ3 638 aaPredicted RBP16.2■□□□□ 0.18
TPM3-208ENST00000341485 ARIH2O95376 493 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 GUCY2FP51841 1108 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 TTMPQ5BVD1 217 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 XKR3Q5GH77 459 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 FAM102BQ5T8I3 360 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 SEPT1Q8WYJ6 367 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 ARL8AQ96BM9 186 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 THAP2Q9H0W7 228 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 TLL2Q9Y6L7 1015 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 NOP56O00567 594 aaKnown RBP16.19■□□□□ 0.18
TPM3-208ENST00000341485 MAPK13O15264 365 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 DDX3YO15523 660 aaKnown RBP16.19■□□□□ 0.18
TPM3-208ENST00000341485 CLSTN1O94985 981 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 ADRB2P07550 413 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 ITGA4P13612 1032 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 TTLL4Q14679 1199 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 IQCKQ8N0W5 287 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 SMC1BQ8NDV3 1235 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 WHAMMQ8TF30 809 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 PIK3R5Q8WYR1 880 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 ISCUQ9H1K1 167 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 MCM3APO60318 1980 aa16.19■□□□□ 0.18
TPM3-208ENST00000341485 GSTTP1A0A1W2PQM5 241 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 ANKRD62A6NC57 917 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 GOLGA8IPA6NC78 632 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 GOLGA8JA6NMD2 632 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 KRIT1O00522 736 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 TXNP10599 105 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 INHBEP58166 350 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 CETN1Q12798 172 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 PPFIA1Q13136 1202 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 GRB14Q14449 540 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 CELF3Q5SZQ8 465 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 KAT5Q92993 513 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 RUFY1Q96T51 708 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 DDX47Q9H0S4 455 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 COG5Q9UP83 839 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 MAFBQ9Y5Q3 323 aaPredicted RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 MYH9P35579 1960 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 ANKRD63C9JTQ0 380 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 CCDC188H7C350 402 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 SHOX2O60902 331 aaPredicted RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 ECM2O94769 699 aaPredicted RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 STBD1O95210 358 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 OATP04181 439 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 ECHS1P30084 290 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 TCF7P36402 384 aaPredicted RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 SNRPFP62306 86 aaKnown RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 MTERF2Q49AM1 385 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 DCAF12L1Q5VU92 463 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 FOXR1Q6PIV2 292 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
TPM3-208ENST00000341485 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 TMEM117Q9H0C3 514 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 AZI2Q9H6S1 392 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 CYP26B1Q9NR63 512 aa16.18■□□□□ 0.18
TPM3-208ENST00000341485 DGAT1O75907 488 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 ADSSP30520 456 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 MXI1P50539 228 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 STAT5BP51692 787 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 CFAP58Q5T655 872 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 EIF1ADQ8N9N8 165 aaKnown RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 TMEM161BQ8NDZ6 487 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 VTI1AQ96AJ9 217 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 VTA1Q9NP79 307 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 PDGFCQ9NRA1 345 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 SLC5A4Q9NY91 659 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 CWC15Q9P013 229 aaKnown RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 TBX20Q9UMR3 447 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 USP20Q9Y2K6 914 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 ARID2Q68CP9 1835 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 IGKV6D-21A0A0A0MT36 114 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 SLC15A5A6NIM6 579 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 PMM2O15305 246 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 IVLP07476 585 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 HSPA9P38646 679 aaKnown RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 MCCD1P59942 119 aaPredicted RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 PAXIP1Q6ZW49 1069 aaPredicted RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 CBWD2Q8IUF1 395 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 SPATA33Q96N06 139 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 TTC7AQ9ULT0 858 aaPredicted RBP16.17■□□□□ 0.18
TPM3-208ENST00000341485 ADGRA2Q96PE1 1338 aa16.17■□□□□ 0.18
TPM3-208ENST00000341485 ZNF233A6NK53 670 aa16.16■□□□□ 0.18
TPM3-208ENST00000341485 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
TPM3-208ENST00000341485 NPTX2P47972 431 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms