RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 HARSP12081 509 aaKnown RBP15.41■□□□□ 0.06
CPSF7-201ENST00000340437 BRAFP15056 766 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 CHRNB2P17787 502 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 PDE6BP35913 854 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 MMP13P45452 471 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 TAS1R2Q8TE23 839 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 HAUS1Q96CS2 278 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 PNMA3Q9UL41 463 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 AGAP1Q9UPQ3 857 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 PIAS1O75925 651 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 FAM182AQ5T1J6 154 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 LMO3Q8TAP4 145 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 POMGNT1Q8WZA1 660 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 STAMBPL1Q96FJ0 436 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 ZNF317Q96PQ6 595 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-201ENST00000340437 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-201ENST00000340437 HOMER3Q9NSC5 361 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 FRMPD4Q14CM0 1322 aa15.41■□□□□ 0.06
CPSF7-201ENST00000340437 A8MUI8 341 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 POC1B-GALNT4F8VUJ3 575 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PI4K2BG5E9Z4 385 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 NFIBO00712 420 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 AGTP01019 485 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 ITGB5P18084 799 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 SCP2P22307 547 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 ITGA8P53708 1063 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 DRP2Q13474 957 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 SLMAPQ14BN4 828 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 SEC14L1Q92503 715 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 SLC5A5Q92911 643 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PAGR1Q9BTK6 254 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 ECT2Q9H8V3 914 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 DMAC2Q9NW81 257 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 ANAPC5Q9UJX4 755 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PFASO15067 1338 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 NPR1P16066 1061 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 MFAP3P55082 362 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 TMED2Q15363 201 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 CNGA2Q16280 664 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 ARMC9Q7Z3E5 817 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PODNQ7Z5L7 613 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 KLHL29Q96CT2 875 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 EHMT1Q9H9B1 1298 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 SEL1LQ9UBV2 794 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 O00370 1275 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 CYP11B1P15538 503 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 CD58P19256 250 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PEX5P50542 639 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 KCNV2Q8TDN2 545 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 PGM2Q96G03 612 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 TXLNGYQ9BZA5 131 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 WNT8AQ9H1J5 351 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.068e-9■■■■■ 27.8
CPSF7-201ENST00000340437 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
CPSF7-201ENST00000340437 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.4■□□□□ 0.06
CPSF7-201ENST00000340437 MYH11P35749 1972 aa15.4■□□□□ 0.06
CPSF7-201ENST00000340437 NUDT17P0C025 328 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 FMO1Q01740 532 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 PPP2R5CQ13362 524 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 SNRNP35Q16560 246 aaKnown RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 TATDN1Q6P1N9 297 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 SYT11Q9BT88 431 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 STMN4Q9H169 189 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 ATXN2Q99700 1313 aaKnown RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 ATP6V1G2O95670 118 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 RARGP13631 454 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 ATF2P15336 505 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 ADRA2BP18089 450 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 GEMIN8Q9NWZ8 242 aaKnown RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 R3HDM2Q9Y2K5 976 aaKnown RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 C5orf60A6NFR6 353 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 IGF2BP3O00425 579 aaKnown RBP eCLIP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 SKAP2O75563 359 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 PLCB3Q01970 1234 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 PLCB4Q15147 1175 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 GMCL1P1Q8NEA9 526 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 CHURC1Q8WUH1 139 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 NT5C1BQ96P26 610 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 KDM4CQ9H3R0 1056 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 TMEM206Q9H813 350 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 RAVER2Q9HCJ3 691 aaKnown RBP15.39■□□□□ 0.05
CPSF7-201ENST00000340437 CEP83Q9Y592 693 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
CPSF7-201ENST00000340437 UGCGQ16739 394 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 CYP4X1Q8N118 509 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 C11orf70Q9BRQ4 267 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 FAM213AQ9BRX8 229 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 YY1AP1Q9H869 796 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 CDK5RAP2Q96SN8 1893 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 COL5A3P25940 1745 aaPredicted RBP15.38■□□□□ 0.05
CPSF7-201ENST00000340437 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 PAEPP09466 180 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 ATF7P17544 494 aaPredicted RBP15.38■□□□□ 0.05
CPSF7-201ENST00000340437 RRM1P23921 792 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms