RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 HPS3Q969F9 1004 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 ZNF558Q96NG5 402 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 STRA6Q9BX79 667 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 FGFBP2Q9BYJ0 223 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 DNAJB4Q9UDY4 337 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 ZMYM2Q9UBW7 1377 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 NT5C1B-RDH14C9J2C7 533 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 CLDN3O15551 220 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 FGF18O76093 207 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 PIGRP01833 764 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MYBP10242 640 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MCF2P10911 925 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 ALDH7A1P49419 539 aaKnown RBP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 OSTNP61366 133 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 KCNA1Q09470 495 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 THNSL1Q8IYQ7 743 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 SPPL3Q8TCT6 385 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 ZNF202O95125 648 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 CSPG5O95196 566 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 DNAJB1P25685 340 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 GRM5P41594 1212 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 MCL1Q07820 350 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 CCDC85BQ15834 202 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-201ENST00000340074 SLC39A4Q6P5W5 647 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 UNC13DQ70J99 1090 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 HVCN1Q96D96 273 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-201ENST00000340074 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
UBE3B-201ENST00000340074 TISP43B9A030 160 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 ANKRD63C9JTQ0 380 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 PTGESO14684 152 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 GALTP07902 379 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 CAMK1Q14012 370 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 PTPROQ16827 1216 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 SEZ6Q53EL9 994 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 L1TD1Q5T7N2 865 aaKnown RBP16.68■□□□□ 0.26
UBE3B-201ENST00000340074 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 SLC39A11Q8N1S5 342 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 GLIS3Q8NEA6 775 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 POF1BQ8WVV4 589 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 IPO9Q96P70 1041 aaKnown RBP16.68■□□□□ 0.26
UBE3B-201ENST00000340074 LMAN2LQ9H0V9 348 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
UBE3B-201ENST00000340074 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
UBE3B-201ENST00000340074 PPM1AP35813 382 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 SLC11A1P49279 550 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 PLCB3Q01970 1234 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 EHHADHQ08426 723 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 DSC1Q08554 894 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 GRIK3Q13003 919 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 ALCAMQ13740 583 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 TMEM173Q86WV6 379 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-201ENST00000340074 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 ACCSQ96QU6 501 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 TMEM175Q9BSA9 504 aa16.67■□□□□ 0.26
UBE3B-201ENST00000340074 KLRC4O43908 158 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 ALDH2P05091 517 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 THP07101 528 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 YARSP54577 528 aaKnown RBP16.66■□□□□ 0.26
UBE3B-201ENST00000340074 UBE3AQ05086 875 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
UBE3B-201ENST00000340074 GLRA4Q5JXX5 417 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 FMR1NBQ8N0W7 255 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-201ENST00000340074 MSTO1Q9BUK6 570 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 TOPORSQ9NS56 1045 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-201ENST00000340074 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 FAN1Q9Y2M0 1017 aa16.66■□□□□ 0.26
UBE3B-201ENST00000340074 A0A0B4J269 797 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 CARNS1A5YM72 827 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 NRP1O14786 923 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-201ENST00000340074 FAM189A1O60320 539 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-201ENST00000340074 MYL1P05976 194 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 PRR29P0C7W0 189 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 TNFSF9P41273 254 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 OR1G1P47890 313 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 KRT17Q04695 432 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 ALKAL1Q6UXT8 129 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 STXBP4Q6ZWJ1 553 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 SYCP3Q8IZU3 236 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 ENGASEQ8NFI3 743 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 BCL7CQ8WUZ0 217 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-201ENST00000340074 TMEM169Q96HH4 297 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 IGSF21Q96ID5 467 aa16.65■□□□□ 0.26
UBE3B-201ENST00000340074 SNX27Q96L92 541 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms