RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 PLCH2O75038 1416 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ATP9BO43861 1147 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ZNF189O75820 626 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 DDHD2O94830 711 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 HPCAP84074 193 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 KIZQ2M2Z5 673 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 CC2D1AQ6P1N0 951 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 ADCK2Q7Z695 626 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ATP11CQ8NB49 1132 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 AK8Q96MA6 479 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 MRGBPQ9NV56 204 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 IL6P05231 212 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 SCP2P22307 547 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 NNMTP40261 264 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 KRT76Q01546 638 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ZNF211Q13398 564 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 RSBN1Q5VWQ0 802 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 CCDC137Q6PK04 289 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 LAD1O00515 517 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 ZBTB39O15060 712 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 ARF4P18085 180 aaPredicted RBP13.5□□□□□ -0.25
USP47-202ENST00000339865 OSBPP22059 807 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 TRIQKQ629K1 86 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 FAM45AQ8TCE6 357 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 AOX1Q06278 1338 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 GUCY1B2O75343 617 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 GFPT1Q06210 699 aaPredicted RBP13.5□□□□□ -0.25
USP47-202ENST00000339865 LRRC31Q6UY01 552 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 RHPN2Q8IUC4 686 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 SCFD1Q8WVM8 642 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 SNF8Q96H20 258 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 FAM153AQ9UHL3 310 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 IKBKBO14920 756 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 MFSD14BQ5SR56 506 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 C11orf96Q7Z7L8 435 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 ATP6V1C1P21283 382 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 LGALS3BPQ08380 585 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 ANKMY2Q8IV38 441 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 C10orf53Q8N6V4 93 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 RSPH1Q8WYR4 309 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
USP47-202ENST00000339865 INTS13Q9NVM9 706 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 CNOT8Q9UFF9 292 aaKnown RBP13.5□□□□□ -0.25
USP47-202ENST00000339865 SMIM31A0A1B0GVY4 71 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 ROR1Q01973 937 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 TRADDQ15628 312 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 RNFT2Q96EX2 444 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 PPP6R2O75170 966 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 SARSP49591 514 aaKnown RBP13.5□□□□□ -0.25
USP47-202ENST00000339865 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 SCN4BQ8IWT1 228 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 TNIP2Q8NFZ5 429 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
USP47-202ENST00000339865 HERC5Q9UII4 1024 aaKnown RBP13.5□□□□□ -0.25
USP47-202ENST00000339865 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 ECSITQ9BQ95 431 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 NUP85Q9BW27 656 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 NDST4Q9H3R1 872 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 MFSD1Q9H3U5 465 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 PCSK1NQ9UHG2 260 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 PNMA8BQ9ULN7 279 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 CENPXA8MT69 81 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 K7ERI5 159 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 DFFAO00273 331 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 CDC25AP30304 524 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 PDAP1Q13442 181 aaKnown RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 PSMC3P17980 439 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 LAYNQ6UX15 382 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 WDR36Q8NI36 951 aaKnown RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 ZNF473Q8WTR7 871 aaKnown RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 SERHL2Q9H4I8 314 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 PEX1O43933 1283 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 FYNP06241 537 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 APRTP07741 180 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 RCN1Q15293 331 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 MEI1Q5TIA1 1274 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 RMDN1Q96DB5 314 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 CEP44Q9C0F1 390 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 NRDE2Q9H7Z3 1164 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms