RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 FAM47DPA6NHR8 397 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 CAPN9O14815 690 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 EDF1O60869 148 aaKnown RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 IVDP26440 423 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 LSAMPQ13449 338 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 KPNB1Q14974 876 aaKnown RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 DCAF17Q5H9S7 520 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 HYIQ5T013 277 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 INTS5Q6P9B9 1019 aaKnown RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 UBL4BQ8N7F7 174 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 MAML1Q92585 1016 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 HAS1Q92839 578 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 GJA10Q969M2 543 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 HAPLN3Q96S86 360 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 METTL14Q9HCE5 456 aaKnown RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 SAR1AQ9NR31 198 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 GRID1Q9ULK0 1009 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 PSMG1O95456 288 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 LYNP07948 512 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 PLA2G4BP0C869 781 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 CYP11B2P19099 503 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 MUTP22033 750 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 CASP4P49662 377 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 MECOMQ03112 1051 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 ITPK1Q13572 414 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 GSTA3Q16772 222 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 SLC45A4Q5BKX6 768 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 RASIP1Q5U651 963 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 SLC13A5Q86YT5 568 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 C12orf50Q8NA57 414 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 DYNLL2Q96FJ2 89 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 NR1H4Q96RI1 486 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 GPR88Q9GZN0 384 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 VCX3BQ9H321 246 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 VCX3AQ9NNX9 186 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 NINJ2Q9NZG7 142 aa10.04□□□□□ -0.8
NECAP1-201ENST00000339754 STX18Q9P2W9 335 aaKnown RBP10.04□□□□□ -0.8
NECAP1-201ENST00000339754 LOC102724428A0A0B4J2F2 783 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 GSC2O15499 205 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CDH16O75309 829 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ITIH2P19823 946 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CRKLP46109 303 aaKnown RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 SIK1P57059 783 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 DRAP1Q14919 205 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 KNOP1Q1ED39 458 aaKnown RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 TCERG1LQ5VWI1 586 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 SUSD4Q5VX71 490 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 GPBP1Q86WP2 473 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 SYCP3Q8IZU3 236 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ANKRD35Q8N283 1001 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 LBHD1Q9BQE6 289 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 STK33Q9BYT3 514 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 GALNT8Q9NY28 637 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 TBC1D30Q9Y2I9 924 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ESYT2A0FGR8 921 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ECEL1O95672 775 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 UBTFL6P0CB48 400 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ZCCHC18P0CG32 403 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CDR2Q01850 454 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 TCEAL1Q15170 157 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 C12orf60Q5U649 245 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CLNKQ7Z7G1 428 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 MTDHQ86UE4 582 aaKnown RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 RHOT2Q8IXI1 618 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 WDR60Q8WVS4 1066 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 CD101Q93033 1021 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 PWWP2AQ96N64 755 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 PIGSQ96S52 555 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ZNF184Q99676 751 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-201ENST00000339754 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 VAT1LQ9HCJ6 419 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 MCM9Q9NXL9 1143 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ZFP69BQ9UJL9 534 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
NECAP1-201ENST00000339754 ERVV-1B6SEH8 477 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 RASA4BC9J798 803 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 C2CD2LO14523 706 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 RASA4O43374 803 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 HNRNPCL1O60812 293 aaKnown RBP10.02□□□□□ -0.81
NECAP1-201ENST00000339754 SPAG7O75391 227 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 SPATA31D3P0C874 917 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 COMTP21964 271 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 INHBCP55103 352 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 RTP1P59025 263 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 PDK4Q16654 411 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms