RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 BNIP3LO60238 219 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 SPAG6O75602 509 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 HSD17B4P51659 736 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 SZRD1Q7Z422 152 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 RNF25Q96BH1 459 aaPredicted RBP13.81□□□□□ -0.2
HLCS-201ENST00000336648 TUFT1Q9NNX1 390 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 ARL2BPQ9Y2Y0 163 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 NEMP1O14524 444 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 RTN2O75298 545 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 MARK3P27448 753 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 CDK17Q00537 523 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 NFX1Q12986 1120 aaKnown RBP13.81□□□□□ -0.2
HLCS-201ENST00000336648 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 STXBP3O00186 592 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 CYP2C19P33261 490 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 GUCY1A3Q02108 690 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 SCN4BQ8IWT1 228 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 PPHLN1Q8NEY8 458 aaKnown RBP13.81□□□□□ -0.2
HLCS-201ENST00000336648 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
HLCS-201ENST00000336648 SERPINB1P30740 379 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 KCNQ4P56696 695 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 TOB2Q14106 344 aaPredicted RBP13.8□□□□□ -0.2
HLCS-201ENST00000336648 EPHA7Q15375 998 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 HIF1AQ16665 826 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 DUOXA2Q1HG44 320 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 KCTD17Q8N5Z5 321 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 B4GALNT2Q8NHY0 566 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
HLCS-201ENST00000336648 RUBCNLQ9H714 662 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 SLC16A4O15374 487 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 KCNA2P16389 499 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 ACTR2P61160 394 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 AGGF1Q8N302 714 aaeCLIP13.8□□□□□ -0.2
HLCS-201ENST00000336648 ZFYVE1Q9HBF4 777 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 LZTS3O60299 673 aaPredicted RBP13.8□□□□□ -0.2
HLCS-201ENST00000336648 CRKP46108 304 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 CYLC2Q14093 348 aaPredicted RBP13.8□□□□□ -0.2
HLCS-201ENST00000336648 PDIA5Q14554 519 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
HLCS-201ENST00000336648 PTPN21Q16825 1174 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 CNGB3Q9NQW8 809 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 MCAMP43121 646 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 C4orf22Q6V702 233 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 ZNF555Q8NEP9 628 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 AIFM3Q96NN9 605 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 SH3GL1Q99961 368 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 GINS4Q9BRT9 223 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 ERBB3P21860 1342 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 POTEMA6NI47 508 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 PJA2O43164 708 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 CDC27P30260 824 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 FAM129AQ9BZQ8 928 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 CASS4Q9NQ75 786 aa13.8□□□□□ -0.2
HLCS-201ENST00000336648 TMEM191CA6NGB0 347 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 SFI1A8K8P3 1242 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ANGPT2O15123 496 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 RAD17O75943 681 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 APOA4P06727 396 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 C4BPBP20851 252 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ZNF235Q14590 738 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 VEPH1Q14D04 833 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 RBBP7Q16576 425 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 FASTKD1Q53R41 847 aaKnown RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 SPATA21Q7Z572 469 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 KCNK16Q96T55 309 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 P3H1Q32P28 736 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 OLFML2BQ68BL8 750 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 LRRC8EQ6NSJ5 796 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 SH3KBP1Q96B97 665 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 SGSM3Q96HU1 749 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 FOPNLQ96NB1 174 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 MPP6Q9NZW5 540 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 DCTN4Q9UJW0 460 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 SLC9A1P19634 815 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 SCP2P22307 547 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 EFL1Q7Z2Z2 1120 aaKnown RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 INPP5FQ9Y2H2 1132 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ZSCAN9O15535 394 aaPredicted RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 EYA4O95677 639 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 KITP10721 976 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ADRA2BP18089 450 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 AGPAT1Q99943 283 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms