RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PRELID2Q8N945 189 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 NSUN6Q8TEA1 469 aaKnown RBP19.02■□□□□ 0.64
LRCH3-201ENST00000334859 MFSD14AQ96MC6 490 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 PI4K2AQ9BTU6 479 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 EPN3Q9H201 632 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 JPH1Q9HDC5 661 aaPredicted RBP19.02■□□□□ 0.64
LRCH3-201ENST00000334859 PICK1Q9NRD5 415 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 GTF3C4Q9UKN8 822 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 ARID2Q68CP9 1835 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 DOCK1Q14185 1865 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 DOCK5Q9H7D0 1870 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 WDR81Q562E7 1941 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 UTRNP46939 3433 aa19.02■□□□□ 0.64
LRCH3-201ENST00000334859 PSAPP07602 524 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 PRKCEQ02156 737 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 PTGISQ16647 500 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 DALRD3Q5D0E6 543 aaKnown RBP19.02■□□□□ 0.63
LRCH3-201ENST00000334859 GPD1LQ8N335 351 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 MCPH1Q8NEM0 835 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 FBXL18Q96ME1 805 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 WRNIP1Q96S55 665 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 SENP7Q9BQF6 1050 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 FAM107BQ9H098 131 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 C17orf75Q9HAS0 396 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 ZDHHC18Q9NUE0 388 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.02■□□□□ 0.63
LRCH3-201ENST00000334859 FZD1Q9UP38 647 aa19.02■□□□□ 0.63
LRCH3-201ENST00000334859 ZNFX1Q9P2E3 1918 aaKnown RBP19.01■□□□□ 0.63
LRCH3-201ENST00000334859 DKC1O60832 514 aaKnown RBP eCLIP19.01■□□□□ 0.63
LRCH3-201ENST00000334859 PPFIA2O75334 1257 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 DGAT1O75907 488 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 CYP1A2P05177 515 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 PYGMP11217 842 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
LRCH3-201ENST00000334859 PEX5P50542 639 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 CCDC60Q8IWA6 550 aaPredicted RBP19.01■□□□□ 0.63
LRCH3-201ENST00000334859 SCYL3Q8IZE3 742 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 ZNF280CQ8ND82 737 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 MORC4Q8TE76 937 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 TATDN2Q93075 761 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 NTPCRQ9BSD7 190 aaKnown RBP19.01■□□□□ 0.63
LRCH3-201ENST00000334859 GJA3Q9Y6H8 435 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 FAM169AQ9Y6X4 670 aa19.01■□□□□ 0.63
LRCH3-201ENST00000334859 CALCAP01258 141 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 RPS12P25398 132 aaKnown RBP19■□□□□ 0.63
LRCH3-201ENST00000334859 MAGEA9P43362 315 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 DCAF15Q66K64 600 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 CD101Q93033 1021 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 IFT74Q96LB3 600 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 POLR3FQ9H1D9 316 aaPredicted RBP19■□□□□ 0.63
LRCH3-201ENST00000334859 ATP6V0A4Q9HBG4 840 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 AS3MTQ9HBK9 375 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 C1orf112Q9NSG2 853 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 UVRAGQ9P2Y5 699 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 SLC9A2Q9UBY0 812 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 KIAA0391O15091 583 aaKnown RBP19■□□□□ 0.63
LRCH3-201ENST00000334859 MAFGO15525 162 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 RGS20O76081 388 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 GTF2H1P32780 548 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 TTC27Q6P3X3 843 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 CCDC137Q6PK04 289 aaKnown RBP19■□□□□ 0.63
LRCH3-201ENST00000334859 FBXO25Q8TCJ0 367 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 XPNPEP1Q9NQW7 623 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 CYP26B1Q9NR63 512 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 CNOT8Q9UFF9 292 aaKnown RBP19■□□□□ 0.63
LRCH3-201ENST00000334859 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 NOVA2Q9UNW9 492 aaKnown RBP19■□□□□ 0.63
LRCH3-201ENST00000334859 PHIPQ8WWQ0 1821 aa19■□□□□ 0.63
LRCH3-201ENST00000334859 TCRBV7S2A1N4TA0A589 114 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 GGPS1O95749 300 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 CTNNA2P26232 953 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 SEC24CP53992 1094 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 ACTR2P61160 394 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 MTERF2Q49AM1 385 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 BRDTQ58F21 947 aaPredicted RBP18.99■□□□□ 0.63
LRCH3-201ENST00000334859 PRAMEF18Q5VWM3 479 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 LMBRD2Q68DH5 695 aaPredicted RBP18.99■□□□□ 0.63
LRCH3-201ENST00000334859 EFCAB13Q8IY85 973 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 REPS2Q8NFH8 660 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 ZNF214Q9UL59 606 aaPredicted RBP18.99■□□□□ 0.63
LRCH3-201ENST00000334859 PTPN22Q9Y2R2 807 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 E7EVH7 732 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 STBD1O95210 358 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 PTGIRP43119 386 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 LIG4P49917 911 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 MCCD1P59942 119 aaPredicted RBP18.99■□□□□ 0.63
LRCH3-201ENST00000334859 AGBL2Q5U5Z8 902 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 DEFB132Q7Z7B7 95 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 ZDHHC14Q8IZN3 488 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 DDX1Q92499 740 aaKnown RBP18.99■□□□□ 0.63
LRCH3-201ENST00000334859 TXLNGYQ9BZA5 131 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 PPANQ9NQ55 473 aaKnown RBP18.99■□□□□ 0.63
LRCH3-201ENST00000334859 PCYOX1Q9UHG3 505 aa18.99■□□□□ 0.63
LRCH3-201ENST00000334859 DCDC2CA8MYV0 355 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 NFKBIEO00221 500 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PTPRAP18433 802 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 GARTP22102 1010 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 RPL21P46778 160 aaKnown RBP18.98■□□□□ 0.63
LRCH3-201ENST00000334859 MAGOHP61326 146 aaKnown RBP18.98■□□□□ 0.63
LRCH3-201ENST00000334859 TMEM132BQ14DG7 1078 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms