RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CHRNA10Q9GZZ6 450 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 RPAP3Q9H6T3 665 aaPredicted RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 TDRD3Q9H7E2 651 aaKnown RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 LPAR3Q9UBY5 353 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 PUF60Q9UHX1 559 aaKnown RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 SRPK3Q9UPE1 567 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 MRPL42Q9Y6G3 142 aaKnown RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 STK36Q9NRP7 1315 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 C17orf102A2RUQ5 167 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 BLACEA4D250 179 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 CFAP69A5D8W1 941 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 FAM86C2PA6NEL3 165 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 FOXO6A8MYZ6 492 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 HOXC11O43248 304 aaPredicted RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 KIF1CO43896 1103 aaKnown RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 HLA-EP13747 358 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 ABCG1P45844 678 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 GRIA4P48058 902 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 USP11P51784 963 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 NEDD9Q14511 834 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 CCDC144BQ3MJ40 725 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 PPP1R15BQ5SWA1 713 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 SYDE2Q5VT97 1194 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 PCNX4Q63HM2 1172 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 B3GNTL1Q67FW5 361 aaPredicted RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 OLFM4Q6UX06 510 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 BNC2Q6ZN30 1099 aaPredicted RBP1.85□□□□□ -2.11
LINC00643-201ENST00000334389 SV2AQ7L0J3 742 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 ZNF605Q86T29 641 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 NUTM1Q86Y26 1132 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 ZNF454Q8N9F8 522 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 DNAAF4Q8WXU2 420 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 PGBD4Q96DM1 585 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 ATG4CQ96DT6 458 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 MYRFLQ96LU7 910 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 SERPINB13Q9UIV8 391 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 KCNG1Q9UIX4 513 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 KCTD3Q9Y597 815 aa1.85□□□□□ -2.11
LINC00643-201ENST00000334389 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 A0A1W2PQ27 194 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 A0A1W2PQ64 194 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 A0A1W2PQC6 194 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 SYNDIG1LA6NDD5 238 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ALOX15BO15296 676 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ASAP2O43150 1006 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 MAGEC1O60732 1142 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 XYLBO75191 536 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 THBS1P07996 1170 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 FGFR3P22607 806 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 AFMP43652 599 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 DGKEP52429 567 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 KRT17Q04695 432 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 SLC39A6Q13433 755 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 LPIN1Q14693 890 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 PTGISQ16647 500 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 TCTN1Q2MV58 587 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 SLC44A4Q53GD3 710 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 FAM133BQ5BKY9 247 aaKnown RBP1.84□□□□□ -2.11
LINC00643-201ENST00000334389 GJC2Q5T442 439 aaPredicted RBP1.84□□□□□ -2.11
LINC00643-201ENST00000334389 C12orf60Q5U649 245 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 SLC8B1Q6J4K2 584 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ZSCAN25Q6NSZ9 544 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 CYB5D1Q6P9G0 228 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 METTL7BQ6UX53 244 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 TRIM72Q6ZMU5 477 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 USP30Q70CQ3 517 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 BIVMQ86UB2 503 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ERC1Q8IUD2 1116 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ABI1Q8IZP0 508 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 LRRC17Q8N6Y2 441 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 TTC13Q8NBP0 860 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 KIAA1524Q8TCG1 905 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 HCAR2Q8TDS4 363 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 SAP25Q8TEE9 199 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ZNF384Q8TF68 577 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 RBCK1Q9BYM8 510 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 POMKQ9H5K3 350 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ZNF408Q9H9D4 720 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 CABP5Q9NP86 173 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 EHD2Q9NZN4 543 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 MTRRQ9UBK8 725 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 ZNF215Q9UL58 517 aaPredicted RBP1.84□□□□□ -2.11
LINC00643-201ENST00000334389 GIT1Q9Y2X7 761 aa1.84□□□□□ -2.11
LINC00643-201ENST00000334389 RSPH10B2B2RC85 870 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 ATP5J2-PTCD1G3V325 749 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 RRP8O43159 456 aaKnown RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 PMPCBO75439 489 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 NPTXRO95502 500 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 C4BPAP04003 597 aaKnown RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 ADH1AP07327 375 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 RSPH10BP0C881 870 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 CDH3P22223 829 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 MCCP23508 829 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 CPT2P23786 658 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 PRKAR2BP31323 418 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 HNF1BP35680 557 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 ABCB5Q2M3G0 1257 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 PROX2Q3B8N5 592 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 LINC00303Q3SY05 128 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 IER5Q5VY09 327 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms