RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TDRKHQ9Y2W6 561 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCYT1BQ9Y5K3 369 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 PIK3CDO00329 1044 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TOP3BO95985 862 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NFICP08651 508 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 HNRNPH2P55795 449 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 DYNLL1P63167 89 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TYSND1Q2T9J0 566 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TJAP1Q5JTD0 557 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ANKRD23Q86SG2 305 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CMTM5Q96DZ9 223 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 HES6Q96HZ4 224 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 WDR12Q9GZL7 423 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TLR7Q9NYK1 1049 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 VAV3Q9UKW4 847 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 GPR89AB7ZAQ6 455 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NPIPA7E9PJI5 369 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 GPR89BP0CG08 455 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NPIPA8P0DM63 369 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MDH1P40925 334 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NNTQ13423 1086 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF827Q17R98 1081 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDCD4Q53EL6 469 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MIB1Q86YT6 1006 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUDT12Q9BQG2 462 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ABCG4Q9H172 646 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 STARD7Q9NQZ5 370 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NMRK1Q9NWW6 199 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCTD5Q9NXV2 234 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NRBP1Q9UHY1 535 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIM66O15016 1216 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 YKT6O15498 198 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 STX11O75558 287 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCDC130P13994 396 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 JAK1P23458 1154 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ITGA1P56199 1179 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 SNX17Q15036 470 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 GRAMD1BQ3KR37 738 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 E4F1Q66K89 784 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 USP51Q70EK9 711 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 SENP7Q9BQF6 1050 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 COMMD8Q9NX08 183 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ADA2Q9NZK5 511 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMEM63CQ9P1W3 806 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 KLHL42Q9P2K6 505 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 PBRM1Q86U86 1689 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAPKBP1O60336 1514 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 PHLPP2Q6ZVD8 1323 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 GNGT2O14610 69 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 APOC1P02654 83 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 HSMCR30P0CW71 290 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TUFMP49411 452 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NAB1Q13506 487 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 HIBCHQ6NVY1 386 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 SMG7Q92540 1137 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 DCUN1D5Q9BTE7 237 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 GRIP2Q9C0E4 1043 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM204AQ9H8W3 233 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 COMMD3-BMI1R4GMX3 469 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NCOA1Q15788 1441 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZCCHC18P0CG32 403 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ERP29P30040 261 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 SWT1Q5T5J6 900 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 BTNL9Q6UXG8 535 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CHKBQ9Y259 395 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 FOXP2O15409 715 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MTSS1O43312 755 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF23P17027 643 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 HSF2Q03933 536 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 BOLA3Q53S33 107 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 RRAGBQ5VZM2 374 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDZD4Q76G19 769 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CAPSLQ8WWF8 208 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MRPL1Q9BYD6 325 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 NT5C3AQ9H0P0 336 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCDC182A6NF36 153 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 OATP04181 439 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 P4HA1P13674 534 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 RPL17P18621 184 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 HK1P19367 917 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATP6V1C1P21283 382 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 EIF5AL1Q6IS14 154 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CYP4F22Q6NT55 531 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MIS18BP1Q6P0N0 1132 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMTC1Q8IUR5 882 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 RMND5BQ96G75 393 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 EIF2AK1Q9BQI3 630 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TPCN1Q9ULQ1 816 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 KLHL33A6NCF5 533 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC2A5P22732 501 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 RGS19P49795 217 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TNFAIP8L3Q5GJ75 292 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 AGGF1Q8N302 714 aaeCLIP6.38□□□□□ -1.399e-7■■□□□ 13.8
CDC42BPA-201ENST00000334218 GPRASP2Q96D09 838 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TBCDQ9BTW9 1192 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PHF11Q9UIL8 331 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 MKLN1Q9UL63 735 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms