RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ADPGKQ9BRR6 497 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 GYPCP04921 128 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 CLDN10P78369 228 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 KCNMA1Q12791 1236 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 USP37Q86T82 979 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 POP1Q99575 1024 aaKnown RBP13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 OSBPL7Q9BZF2 842 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 AGO3Q9H9G7 860 aaKnown RBP13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 PDE11AQ9HCR9 933 aa13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
TRIM49B-201ENST00000332682 MROH7Q68CQ1 1323 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 CITO14578 2027 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 RALGAPA2Q2PPJ7 1873 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 EPHB6O15197 1021 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 PMM2O15305 246 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 RPS6KA5O75582 802 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 NPTXRO95502 500 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 STAG3L1P0CL83 205 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 CXCL8P10145 99 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 DLATP10515 647 aaKnown RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 GHRP10912 638 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 GCLMP48507 274 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 MXI1P50539 228 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 OSTNP61366 133 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 MYL7Q01449 175 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 TRIM14Q14142 442 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 LPIN1Q14693 890 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 ENOX2Q16206 610 aaKnown RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 UBXN11Q5T124 520 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 C1orf53Q5VUE5 145 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 ANKRD33Q7Z3H0 272 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 APBB1IPQ7Z5R6 666 aaPredicted RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 MCOLN1Q9GZU1 580 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 GCNT4Q9P109 453 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
TRIM49B-201ENST00000332682 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 P4HA2O15460 535 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 MEFVO15553 781 aaPredicted RBP13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 STX10O60499 249 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 CLTAP09496 248 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 GTF2H1P32780 548 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 GRM5P41594 1212 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 GSDMDP57764 484 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 POU5F1Q01860 360 aaKnown RBP13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 KYAT1Q16773 422 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 GBP6Q6ZN66 633 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 C15orf39Q6ZRI6 1047 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 FAM84AQ96KN4 292 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 TMEM8AQ9HCN3 771 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 FAM207AQ9NSI2 230 aaPredicted RBP13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
TRIM49B-201ENST00000332682 GPR182O15218 404 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 TRIM21P19474 475 aaKnown RBP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 SLC9A1P19634 815 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 PON1P27169 355 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 CD52P31358 61 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 GOLGA8FQ08AF8 430 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 GOLGA8DPQ0D2H9 430 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 PAK2Q13177 524 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 EPC2Q52LR7 807 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 LMBRD2Q68DH5 695 aaPredicted RBP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 KRT39Q6A163 491 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 TRIM65Q6PJ69 517 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 USP38Q8NB14 1042 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 ZNF516Q92618 1163 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 TOX2Q96NM4 488 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms