RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FGGP02679 453 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 GLRA2P23416 452 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 ACTN2P35609 894 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 PDE6CP51160 858 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 C11orf63Q6NUN7 778 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 KCNN1Q92952 543 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 TATDN2Q93075 761 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 NIFKQ9BYG3 293 aaKnown RBP18.72■□□□□ 0.59
DDX28-201ENST00000332395 ALG6Q9Y672 507 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 LRRIQ4A6NIV6 560 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 ARL2P36404 184 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 NAMPTP43490 491 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 ERVK-9P63128 1117 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 CDR2Q01850 454 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 ALS2CLQ60I27 953 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 C15orf39Q6ZRI6 1047 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 DHX38Q92620 1227 aaKnown RBP18.72■□□□□ 0.59
DDX28-201ENST00000332395 FAM84AQ96KN4 292 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 CEP89Q96ST8 783 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 PI4K2AQ9BTU6 479 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
DDX28-201ENST00000332395 STYXL1Q9Y6J8 313 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 GSTTP1A0A1W2PQM5 241 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 IRF6O14896 467 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 SCP2P22307 547 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 CLDN10P78369 228 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 IRX3P78415 501 aaPredicted RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 GCNT1Q02742 428 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 DEPTORQ8TB45 409 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 WHAMMQ8TF30 809 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 ZNF516Q92618 1163 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 RNPC3Q96LT9 517 aaKnown RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 PCYT2Q99447 389 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 SLITRK6Q9H5Y7 841 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 LCMT1Q9UIC8 334 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 SIP14410 1827 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 A0A0G2JLL6 359 aaPredicted RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 HSF2BPO75031 334 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 ZC3H11AO75152 810 aaKnown RBP eCLIP18.71■□□□□ 0.59
DDX28-201ENST00000332395 GUCY2FP51841 1108 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 NLRP11P59045 1033 aaKnown RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 PSMD6Q15008 389 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 ENOSF1Q7L5Y1 443 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 PRRT2Q7Z6L0 340 aaPredicted RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 SRLQ86TD4 932 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 GOLGA6L1Q8N7Z2 621 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 EIF1ADQ8N9N8 165 aaKnown RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 PROCA1Q8NCQ7 364 aaPredicted RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 AFAP1L1Q8TED9 768 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 FNBP1Q96RU3 617 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 SH3GL2Q99962 352 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 CHORDC1Q9UHD1 332 aaPredicted RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 AMACRQ9UHK6 382 aa18.71■□□□□ 0.59
DDX28-201ENST00000332395 AGO2Q9UKV8 859 aaKnown RBP18.71■□□□□ 0.59
DDX28-201ENST00000332395 K7ERI5 159 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 KIAA0391O15091 583 aaKnown RBP18.7■□□□□ 0.58
DDX28-201ENST00000332395 ATMINO43313 823 aaPredicted RBP18.7■□□□□ 0.58
DDX28-201ENST00000332395 MTA2O94776 668 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 CLSTN1O94985 981 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 PIGRP01833 764 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 IREB2P48200 963 aaKnown RBP18.7■□□□□ 0.58
DDX28-201ENST00000332395 CUL1Q13616 776 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 NEDD9Q14511 834 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 LMBRD2Q68DH5 695 aaPredicted RBP18.7■□□□□ 0.58
DDX28-201ENST00000332395 MREGQ8N565 214 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDX28-201ENST00000332395 DDX1Q92499 740 aaKnown RBP18.7■□□□□ 0.58
DDX28-201ENST00000332395 ALG3Q92685 438 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 C1orf112Q9NSG2 853 aa18.7■□□□□ 0.58
DDX28-201ENST00000332395 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
DDX28-201ENST00000332395 MIF4GDA9UHW6 222 aaKnown RBP18.69■□□□□ 0.58
DDX28-201ENST00000332395 BHMG1C9JSJ3 638 aaPredicted RBP18.69■□□□□ 0.58
DDX28-201ENST00000332395 KRT5P13647 590 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 RFC5P40937 340 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 ACOT2P49753 483 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 WNT7BP56706 349 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 RUFY1Q96T51 708 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 HAPLN2Q9GZV7 340 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 TMEM110-MUSTN1A8MSY1 372 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 OPA1O60313 960 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 TNNI1P19237 187 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 ECHS1P30084 290 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 STAT5BP51692 787 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 HLTFQ14527 1009 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX28-201ENST00000332395 TARBP2Q15633 366 aaKnown RBP18.69■□□□□ 0.58
DDX28-201ENST00000332395 ZACNQ401N2 412 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 MAATS1Q7Z4T9 603 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 CCDC26Q8TAB7 109 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 ZBTB45Q96K62 511 aaPredicted RBP18.69■□□□□ 0.58
DDX28-201ENST00000332395 FAM81BQ96LP2 452 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 NAP1L3Q99457 506 aaPredicted RBP18.69■□□□□ 0.58
DDX28-201ENST00000332395 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
DDX28-201ENST00000332395 NRBP2Q9NSY0 501 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 LRRC37A2A6NM11 1700 aa18.69■□□□□ 0.58
DDX28-201ENST00000332395 CYP1A2P05177 515 aa18.68■□□□□ 0.58
DDX28-201ENST00000332395 TGFB3P10600 412 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms