RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SLX1AQ9BQ83 275 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 LBHD1Q9BQE6 289 aaPredicted RBP19.39■□□□□ 0.7
PKP3-201ENST00000331563 YIPF2Q9BWQ6 316 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 ROPN1BQ9BZX4 212 aaPredicted RBP19.39■□□□□ 0.7
PKP3-201ENST00000331563 ROPN1Q9HAT0 212 aaPredicted RBP19.39■□□□□ 0.7
PKP3-201ENST00000331563 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
PKP3-201ENST00000331563 NVLO15381 856 aaKnown RBP19.39■□□□□ 0.69
PKP3-201ENST00000331563 ATP5HO75947 161 aa19.39■□□□□ 0.69
PKP3-201ENST00000331563 XRCC5P13010 732 aaKnown RBP19.39■□□□□ 0.69
PKP3-201ENST00000331563 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
PKP3-201ENST00000331563 LCA5Q86VQ0 697 aa19.39■□□□□ 0.69
PKP3-201ENST00000331563 DNAJC19Q96DA6 116 aa19.39■□□□□ 0.69
PKP3-201ENST00000331563 LRMDAQ9H2I8 198 aa19.39■□□□□ 0.69
PKP3-201ENST00000331563 DNAJC17Q9NVM6 304 aaKnown RBP19.39■□□□□ 0.69
PKP3-201ENST00000331563 MTMR4Q9NYA4 1195 aa19.39■□□□□ 0.69
PKP3-201ENST00000331563 TDP2O95551 362 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 CHRNA3P32297 505 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 GABPAQ06546 454 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 TNIP1Q15025 636 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 TTBK2Q6IQ55 1244 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 PODNQ7Z5L7 613 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 KSR1Q8IVT5 923 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 RBBP8NLQ8NC74 664 aaPredicted RBP19.38■□□□□ 0.69
PKP3-201ENST00000331563 ALG3Q92685 438 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 TBC1D10AQ9BXI6 508 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 TDRD3Q9H7E2 651 aaKnown RBP19.38■□□□□ 0.69
PKP3-201ENST00000331563 SEC63Q9UGP8 760 aaKnown RBP19.38■□□□□ 0.69
PKP3-201ENST00000331563 SCAF8Q9UPN6 1271 aaKnown RBP19.38■□□□□ 0.69
PKP3-201ENST00000331563 SLC37A4O43826 429 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 TNFAIP8L3Q5GJ75 292 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 DACT2Q5SW24 774 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 CGB2Q6NT52 195 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 ARHGEF18Q6ZSZ5 1173 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 COA7Q96BR5 231 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 KIAA1683Q9H0B3 1180 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 CTTNBP2NLQ9P2B4 639 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 INTUQ9ULD6 942 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 ZNF510Q9Y2H8 683 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 SHMT1P34896 483 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 PRKCIP41743 596 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 MPP2Q14168 576 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 MTFR1Q15390 333 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 ZC3H18Q86VM9 953 aaKnown RBP19.38■□□□□ 0.69
PKP3-201ENST00000331563 SRRM1Q8IYB3 904 aaKnown RBP19.38■□□□□ 0.69
PKP3-201ENST00000331563 ANKLE1Q8NAG6 615 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 LRRC8CQ8TDW0 803 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 NT5C3AQ9H0P0 336 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 DNAJC18Q9H819 358 aa19.38■□□□□ 0.69
PKP3-201ENST00000331563 PENKP01210 267 aaPredicted RBP19.37■□□□□ 0.69
PKP3-201ENST00000331563 STAT1P42224 750 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 PTGIRP43119 386 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 MARSP56192 900 aaKnown RBP19.37■□□□□ 0.69
PKP3-201ENST00000331563 FOXB2Q5VYV0 432 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 FOXR2Q6PJQ5 311 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 KCTD1Q719H9 257 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 PHC3Q8NDX5 983 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 SCFD1Q8WVM8 642 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 CDC42EP4Q9H3Q1 356 aaKnown RBP19.37■□□□□ 0.69
PKP3-201ENST00000331563 GCNT4Q9P109 453 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 AJAP1Q9UKB5 411 aaPredicted RBP19.37■□□□□ 0.69
PKP3-201ENST00000331563 YDJCA8MPS7 323 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 MAFGO15525 162 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 RAD17O75943 681 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 GSTA2P09210 222 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 FXR2P51116 673 aaKnown RBP eCLIP19.37■□□□□ 0.698e-7■■■□□ 17.5
PKP3-201ENST00000331563 ECM1Q16610 540 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 GJA10Q969M2 543 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 SERPINB12Q96P63 405 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 IQCGQ9H095 443 aaKnown RBP19.37■□□□□ 0.69
PKP3-201ENST00000331563 IGSF9BQ9UPX0 1349 aa19.37■□□□□ 0.69
PKP3-201ENST00000331563 SKIP12755 728 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 KCNJ1P48048 391 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 RASSF2P50749 326 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 STRN3Q13033 797 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 IRGCQ6NXR0 463 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 TTC27Q6P3X3 843 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 PRELID2Q8N945 189 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 MAGEB18Q96M61 343 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 MTMR9Q96QG7 549 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 PHACTR1Q9C0D0 580 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 NMRK1Q9NWW6 199 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 STOML1Q9UBI4 398 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 NRXN2Q9P2S2 1712 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 ANKRD63C9JTQ0 380 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 MAPK13O15264 365 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 POLGP54098 1239 aaPredicted RBP19.36■□□□□ 0.69
PKP3-201ENST00000331563 CCDC15Q0P6D6 951 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 TMEM62Q0P6H9 643 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 LLGL1Q15334 1064 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 CLUL1Q15846 466 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 LNX1Q8TBB1 728 aaPredicted RBP19.36■□□□□ 0.69
PKP3-201ENST00000331563 GRAMD1AQ96CP6 724 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 GBP5Q96PP8 586 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 TMCO1Q9UM00 188 aa19.36■□□□□ 0.69
PKP3-201ENST00000331563 CBX6O95503 412 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 DESP17661 470 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 KCNA3P22001 575 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 SH3BP5LQ7L8J4 393 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms