RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 MAP4K3Q8IVH8 894 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 SLC7A14Q8TBB6 771 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 PGBD1Q96JS3 809 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 TDRD15B5MCY1 1934 aaKnown RBP16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 SLC5A9Q2M3M2 681 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 NIPA1Q7RTP0 329 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 ZNF410Q86VK4 478 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 ZC3H10Q96K80 434 aaKnown RBP16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 ZFP14Q9HCL3 533 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 AGPAT5Q9NUQ2 364 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 PCDHA10Q9Y5I2 948 aa16.59■□□□□ 0.25
CTHRC1-201ENST00000330295 LNP1A1A4G5 178 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 IPO5O00410 1097 aaKnown RBP16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 SEC24BO95487 1268 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 OATP04181 439 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 GDI1P31150 447 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 RTP2Q5QGT7 225 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 TTC22Q5TAA0 569 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 CTCFLQ8NI51 663 aaPredicted RBP16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 CLSTN3Q9BQT9 956 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 UBN1Q9NPG3 1134 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 TMEM9BQ9NQ34 198 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 NRBP2Q9NSY0 501 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 PDCD11Q14690 1871 aaKnown RBP16.58■□□□□ 0.24
CTHRC1-201ENST00000330295 CCDC163A0A0D9SF12 145 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 ZNF862O60290 1169 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 AKAP3O75969 853 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 RHOP08100 348 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 CEBPBP17676 345 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 PSMC3P17980 439 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 ZNF76P36508 570 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 FGD1P98174 961 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 C19orf57Q0VDD7 668 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 WDR44Q5JSH3 913 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 DGKKQ5KSL6 1271 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 AXDND1Q5T1B0 1012 aaPredicted RBP16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 CWC27Q6UX04 472 aaKnown RBP16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 DEFB124Q8NES8 71 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 MAP3K14Q99558 947 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 LZTS2Q9BRK4 669 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 ASXL3Q9C0F0 2248 aa16.57■□□□□ 0.24
CTHRC1-201ENST00000330295 ACACAQ13085 2346 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 CACNA1EQ15878 2313 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 ASCC3Q8N3C0 2202 aaKnown RBP16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 ARL5CA6NH57 179 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 PCNX2A6NKB5 2137 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 CAVIN2O95810 425 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 PXNP49023 591 aaPredicted RBP16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 SCNN1GP51170 649 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 MLLT6P55198 1093 aaPredicted RBP16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 PRKCEQ02156 737 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 TRDNQ13061 729 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 FAM78AQ5JUQ0 283 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 UBXN11Q5T124 520 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 VITQ6UXI7 678 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 MSANTD3Q96H12 275 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 GAD1Q99259 594 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 MKNK1Q9BUB5 465 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 AVENQ9NQS1 362 aaPredicted RBP16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 EML5Q05BV3 1969 aa16.56■□□□□ 0.24
CTHRC1-201ENST00000330295 FAM221BA6H8Z2 402 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 FAM86B1E9PN63 330 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 NRG2O14511 850 aaPredicted RBP16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 FOSP01100 380 aaPredicted RBP16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 FAM86B2P0C5J1 330 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 ITGA4P13612 1032 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 SREBF1P36956 1147 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 MLH1P40692 756 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 PLK5Q496M5 336 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 LURAP1LQ8IV03 231 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 PIK3R5Q8WYR1 880 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 SAMM50Q9Y512 469 aa16.55■□□□□ 0.24
CTHRC1-201ENST00000330295 IGLV3-22A0A075B6J6 115 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 ZNF263O14978 683 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 ADAM12O43184 909 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 DNM2P50570 870 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 CREB5Q02930 508 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 TARBP2Q15633 366 aaKnown RBP16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 PSMD5Q16401 504 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms