RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 COMTP21964 271 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 PDE6CP51160 858 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 CDR2Q01850 454 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 USP37Q86T82 979 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 TRPM4Q8TD43 1214 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 ATP8B4Q8TF62 1192 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 DDX1Q92499 740 aaKnown RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 DHX38Q92620 1227 aaKnown RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 IFT74Q96LB3 600 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 DPH5Q9H2P9 285 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 SSC5DA1L4H1 1573 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 SIP14410 1827 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 SPDYE16A6NNV3 312 aaPredicted RBP15.66■□□□□ 0.1
TPM3-206ENST00000330188 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.1
TPM3-206ENST00000330188 SUPT20HL2P0C7V6 817 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 PEX5P50542 639 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 SP2Q02086 613 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 SUPT20HL1Q3ZLR7 823 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 CEP85LQ5SZL2 805 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 MIS18BP1Q6P0N0 1132 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 ZNF564Q8TBZ8 553 aaPredicted RBP15.66■□□□□ 0.1
TPM3-206ENST00000330188 MORC4Q8TE76 937 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 CD101Q93033 1021 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 BICD1Q96G01 975 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 FAM213AQ9BRX8 229 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 TRPC6Q9Y210 931 aa15.66■□□□□ 0.1
TPM3-206ENST00000330188 TULP2O00295 520 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 DR1Q01658 176 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 MTERF2Q49AM1 385 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 XKR3Q5GH77 459 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 KDM7AQ6ZMT4 941 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 TMC3Q7Z5M5 1100 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 ZNF653Q96CK0 615 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 ATP6V1G3Q96LB4 118 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 NUP85Q9BW27 656 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 RAB17Q9H0T7 212 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 TMBIM4Q9HC24 238 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 GTF3C4Q9UKN8 822 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 FAM187AA6NFU0 413 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 H0YCG3 227 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 GCNT1Q02742 428 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 MTMR3Q13615 1198 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 DHX34Q14147 1143 aaKnown RBP15.65■□□□□ 0.1
TPM3-206ENST00000330188 NOL9Q5SY16 702 aaKnown RBP15.65■□□□□ 0.1
TPM3-206ENST00000330188 EMC10Q5UCC4 262 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 DUPD1Q68J44 220 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 C15orf39Q6ZRI6 1047 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 SRLQ86TD4 932 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 ZNF516Q92618 1163 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 BTBD6Q96KE9 485 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 FAM84AQ96KN4 292 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 PI4K2AQ9BTU6 479 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 MAF1Q9H063 256 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.1
TPM3-206ENST00000330188 AFG3L2Q9Y4W6 797 aa15.65■□□□□ 0.1
TPM3-206ENST00000330188 HMGB1P1B2RPK0 211 aaPredicted RBP15.64■□□□□ 0.09
TPM3-206ENST00000330188 HSPA6P17066 643 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ATP4AP20648 1035 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 CTNNA1P35221 906 aaKnown RBP15.64■□□□□ 0.09
TPM3-206ENST00000330188 EMC2Q15006 297 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 TTC19Q6DKK2 380 aaPredicted RBP15.64■□□□□ 0.09
TPM3-206ENST00000330188 CPNE8Q86YQ8 564 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ZNF526Q8TF50 670 aaPredicted RBP15.64■□□□□ 0.09
TPM3-206ENST00000330188 ERP44Q9BS26 406 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 TRIM31Q9BZY9 425 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 MTFR1LQ9H019 292 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 HOXC10Q9NYD6 342 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 UVRAGQ9P2Y5 699 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 LCMT1Q9UIC8 334 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 MYPNQ86TC9 1320 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 A6NNZ2 444 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 EXTL3O43909 919 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 PHF2O75151 1096 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ZC3H11AO75152 810 aaKnown RBP eCLIP15.64■□□□□ 0.09
TPM3-206ENST00000330188 NR1D1P20393 614 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 CTNNA2P26232 953 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ABCD1P33897 745 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ATP1A2P50993 1020 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 CLDN10P78369 228 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 PDCLQ13371 301 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 CLEC16AQ2KHT3 1053 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 TUBB8Q3ZCM7 444 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 SEL1L2Q5TEA6 688 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ACAD10Q6JQN1 1059 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ENOSF1Q7L5Y1 443 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 JAMLQ86YT9 394 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 ZDHHC14Q8IZN3 488 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 PRELID2Q8N945 189 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 OR2W6PQ8NHA6 318 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 GLG1Q92896 1179 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 GGA3Q9NZ52 723 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 RSPH14Q9UHP6 348 aa15.64■□□□□ 0.09
TPM3-206ENST00000330188 RRP15Q9Y3B9 282 aaKnown RBP15.64■□□□□ 0.09
TPM3-206ENST00000330188 ATG7O95352 703 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 GGPS1O95749 300 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 ICAM3P32942 547 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 PTGIRP43119 386 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms