RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SLC13A5Q86YT5 568 aaPredicted RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 CCDC114Q96M63 670 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 RUNDC3BQ96NL0 473 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SH2D3AQ9BRG2 576 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 NUP85Q9BW27 656 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 ST6GALNAC4Q9H4F1 302 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 COL20A1Q9P218 1284 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 TCRBV7S2A1N4TA0A589 114 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 SLC16A4O15374 487 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 FMO1Q01740 532 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
BRCC3-201ENST00000330045 NIPA1Q7RTP0 329 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 MTMR14Q8NCE2 650 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 IL31RAQ8NI17 732 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 BTBD6Q96KE9 485 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 IWS1Q96ST2 819 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 PTPN22Q9Y2R2 807 aa16.49■□□□□ 0.23
BRCC3-201ENST00000330045 CYP1A2P05177 515 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 ADRB2P07550 413 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
BRCC3-201ENST00000330045 PEX3P56589 373 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 SLMAPQ14BN4 828 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 ANKRD20A8PQ5CZ79 823 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 SHC3Q92529 594 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 AGO4Q9HCK5 861 aaKnown RBP16.48■□□□□ 0.23
BRCC3-201ENST00000330045 DNM1LO00429 736 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 RASSF9O75901 435 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 LYPLA2O95372 231 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 AGTP01019 485 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 ICAM1P05362 532 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 RARAP10276 462 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 RARGP13631 454 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 FGFR4P22455 802 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 CAP2P40123 477 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 IFI35P80217 286 aaPredicted RBP16.48■□□□□ 0.23
BRCC3-201ENST00000330045 SPRED3Q2MJR0 410 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 TKFCQ3LXA3 575 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 UBAP2Q5T6F2 1119 aaKnown RBP16.48■□□□□ 0.23
BRCC3-201ENST00000330045 CPNE8Q86YQ8 564 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 UHMK1Q8TAS1 419 aaKnown RBP16.48■□□□□ 0.23
BRCC3-201ENST00000330045 SEMA4DQ92854 862 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 ART4Q93070 314 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 TMEM109Q9BVC6 243 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 GTF3C4Q9UKN8 822 aa16.48■□□□□ 0.23
BRCC3-201ENST00000330045 NFIBO00712 420 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 RIPK2O43353 540 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 KCNJ1P48048 391 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 NCKAP1LP55160 1127 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 RWDD2BP57060 319 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 SIX1Q15475 284 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 CYFIP1Q7L576 1253 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 P3H4Q92791 437 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 TEPSINQ96N21 525 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 ZNF317Q96PQ6 595 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 SLC40A1Q9NP59 571 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 KLC4Q9NSK0 619 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 UVRAGQ9P2Y5 699 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 TMEM150BA6NC51 233 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 ANKRD63C9JTQ0 380 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 CYP11B1P15538 503 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 MCCD1P59942 119 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 SPP2Q13103 211 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 LACTB2Q53H82 288 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 KRT39Q6A163 491 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 TRMT1LQ7Z2T5 733 aaKnown RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
BRCC3-201ENST00000330045 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 TIPINQ9BVW5 301 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 UBIAD1Q9Y5Z9 338 aa16.47■□□□□ 0.23
BRCC3-201ENST00000330045 FZD9O00144 591 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
BRCC3-201ENST00000330045 CDR2Q01850 454 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 MTMR1Q13613 665 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 EPS8L3Q8TE67 593 aaKnown RBP16.46■□□□□ 0.23
BRCC3-201ENST00000330045 CCT6BQ92526 530 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 ZNF536O15090 1300 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 ADSSP30520 456 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 PDE6CP51160 858 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
BRCC3-201ENST00000330045 FAM102BQ5T8I3 360 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 PCNX4Q63HM2 1172 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 FAM83AQ86UY5 434 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 C12orf50Q8NA57 414 aaPredicted RBP16.46■□□□□ 0.23
BRCC3-201ENST00000330045 HELQQ8TDG4 1101 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 PARD3BQ8TEW8 1205 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 CLEC4DQ8WXI8 215 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 STMN4Q9H169 189 aaPredicted RBP16.46■□□□□ 0.23
BRCC3-201ENST00000330045 INTS9Q9NV88 658 aaKnown RBP16.46■□□□□ 0.23
BRCC3-201ENST00000330045 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms