RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 MAPK6Q16659 721 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 DGKDQ16760 1214 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 ARHGAP44Q17R89 818 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 SV2AQ7L0J3 742 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 MRPL4Q9BYD3 311 aaKnown RBP21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 GNEQ9Y223 722 aaKnown RBP21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 COQ4Q9Y3A0 265 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 DAAM1Q9Y4D1 1078 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 KIF3CO14782 793 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 EVI5O60447 810 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 PRKCBP05771 671 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 FERP16591 822 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 AMPD2Q01433 879 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 GRM1Q13255 1194 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 LONRF2Q1L5Z9 754 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 ZNF516Q92618 1163 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 FAM84AQ96KN4 292 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 C2orf40Q9H1Z8 148 aa21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.93■■□□□ 1.1
RIPPLY3-201ENST00000329553 MAGEB2O15479 319 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 ASAP2O43150 1006 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 LDHAP00338 332 aaKnown RBP21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 TFDP1Q14186 410 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 PSMD6Q15008 389 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 LINC01465Q8N7H1 131 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 ACO2Q99798 780 aaKnown RBP21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 TSGA10Q9BZW7 698 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 FOXN3O00409 490 aaPredicted RBP21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 MAP2K7O14733 419 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 CLDN3O15551 220 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 RFX1P22670 979 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 CTGFP29279 349 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 PTENP60484 403 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 SMC1AQ14683 1233 aaKnown RBP21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 OLFML2BQ68BL8 750 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 TAS1R2Q8TE23 839 aa21.92■■□□□ 1.1
RIPPLY3-201ENST00000329553 COL1A2P08123 1366 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 MACROD2A1Z1Q3 448 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 TNPO2O14787 897 aaKnown RBP21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 PJA2O43164 708 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 TOM1L1O75674 476 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 HARSP12081 509 aaKnown RBP21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 RGS2P41220 211 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 CLDN10P78369 228 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 IRF5Q13568 498 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 SEZ6Q53EL9 994 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 FZD8Q9H461 694 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 PDE11AQ9HCR9 933 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 TMEM88BA6NKF7 163 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 GPC3P51654 580 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 LMBRD2Q68DH5 695 aaPredicted RBP21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 MTHFD1LQ6UB35 978 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 ZBTB33Q86T24 672 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 SMC1BQ8NDV3 1235 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 FBXL13Q8NEE6 735 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 LENG1Q96BZ8 264 aaPredicted RBP21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 FNBP1Q96RU3 617 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 TCHPQ9BT92 498 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 MINDY3Q9H8M7 445 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 RAB20Q9NX57 234 aa21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 RBAKQ9NYW8 714 aaPredicted RBP21.91■■□□□ 1.1
RIPPLY3-201ENST00000329553 A6NJR5 290 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 INO80B-WBP1J3KQ70 363 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 IRX5P78411 483 aaPredicted RBP21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 C15orf39Q6ZRI6 1047 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 KAT5Q92993 513 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 PNKPQ96T60 521 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 INO80BQ9C086 356 aaPredicted RBP21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 IFT122Q9HBG6 1241 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 ACKR2O00590 384 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 CA12O43570 354 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 TFRCP02786 760 aaKnown RBP21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 TNNI1P19237 187 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 OAS2P29728 719 aaKnown RBP21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 PPFIA1Q13136 1202 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 BEND6Q5SZJ8 279 aaPredicted RBP21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 MARCH8Q5T0T0 291 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 SOCS4Q8WXH5 440 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 SECISBP2LQ93073 1101 aaKnown RBP21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 APBA2Q99767 749 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 SALL4Q9UJQ4 1053 aa21.9■■□□□ 1.1
RIPPLY3-201ENST00000329553 CTAGE15A4D2H0 777 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 ABLIM1O14639 778 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 FAM189A1O60320 539 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 IGHA2P01877 340 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 IQCF3P0C7M6 154 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 CTAGE8P0CG41 777 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 MBTD1Q05BQ5 628 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 GRIK4Q16099 956 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 PAXIP1Q6ZW49 1069 aaPredicted RBP21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 CTAGE6Q86UF2 777 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 CTAGE4Q8IX94 777 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 PTPRJQ12913 1337 aa21.89■■□□□ 1.09
RIPPLY3-201ENST00000329553 TNFSF9P41273 254 aa21.88■■□□□ 1.09
RIPPLY3-201ENST00000329553 TAF3Q5VWG9 929 aa21.88■■□□□ 1.09
RIPPLY3-201ENST00000329553 CYP4F22Q6NT55 531 aa21.88■■□□□ 1.09
RIPPLY3-201ENST00000329553 TLK2Q86UE8 772 aa21.88■■□□□ 1.09
RIPPLY3-201ENST00000329553 PPM1KQ8N3J5 372 aa21.88■■□□□ 1.09
RIPPLY3-201ENST00000329553 ELMO3Q96BJ8 720 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms