RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NPTXRO95502 500 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 TRIM49P0CI25 452 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 TRIM49CP0CI26 452 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 GHRP10912 638 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 SELPP16109 830 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 TNFSF9P41273 254 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 PAK2Q13177 524 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 LRRC8DQ7L1W4 858 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 NECAB2Q7Z6G3 386 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 PARD3BQ8TEW8 1205 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 PAWRQ96IZ0 340 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 ERGIC2Q96RQ1 377 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 ST3GAL5Q9UNP4 418 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 LRRIQ3A6PVS8 624 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 CLTAP09496 248 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 GRM5P41594 1212 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 DLG4P78352 724 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 TLE2Q04725 743 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 SEZ6Q53EL9 994 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 TMC6Q7Z403 805 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 DRC7Q8IY82 874 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 THNSL1Q8IYQ7 743 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 CEP120Q8N960 986 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 AGO3Q9H9G7 860 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 CD52P31358 61 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 GTF2H1P32780 548 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 DEKP35659 375 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 FMO5P49326 533 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 CLDN10P78369 228 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 MBTPS1Q14703 1052 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 SURF1Q15526 300 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 ENOX2Q16206 610 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 CCDC127Q96BQ5 260 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 EIF2AQ9BY44 585 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 PADI3Q9ULW8 664 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 GTPBP10A4D1E9 387 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 IL18RAPO95256 599 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 MYL7Q01449 175 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 SYCP1Q15431 976 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 PTPN21Q16825 1174 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 OSBPL7Q9BZF2 842 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 RPF1Q9H9Y2 349 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 ATP11BQ9Y2G3 1177 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 SIK3Q9Y2K2 1263 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 CITO14578 2027 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 BRCA2P51587 3418 aa11.12□□□□□ -0.63
VIPAS39-201ENST00000327028 DNAH12Q6ZR08 3092 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 PMM2O15305 246 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 P4HA2O15460 535 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 WNT7BP56706 349 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 PPP3CAQ08209 521 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 NFX1Q12986 1120 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TWF2Q6IBS0 349 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TMEM192Q8IY95 271 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 SPC24Q8NBT2 197 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 FNBP1Q96RU3 617 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 CCDC94Q9BW85 323 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TRIM6Q9C030 488 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 PDE11AQ9HCR9 933 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 GOLGA6L6A8MZA4 724 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 CXCL8P10145 99 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 DLATP10515 647 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 MXI1P50539 228 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 OSTNP61366 133 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 DSC3Q14574 896 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 LRRC26Q2I0M4 334 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 CBWD6Q4V339 395 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 CBWD3Q5JTY5 395 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 CBWD5Q5RIA9 395 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 FAM43BQ6ZT52 329 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 UBE2Q1Q7Z7E8 422 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 WDR49Q8IV35 697 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 ACAP3Q96P50 834 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TMX1Q9H3N1 280 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TMEM8AQ9HCN3 771 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TOPORSQ9NS56 1045 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 TBX21Q9UL17 535 aa11.11□□□□□ -0.63
VIPAS39-201ENST00000327028 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 GCLMP48507 274 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 AP3M2P53677 418 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 TBX2Q13207 712 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 TRIM14Q14142 442 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 GBP6Q6ZN66 633 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 PTPRJQ12913 1337 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 MEFVO15553 781 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms