RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 WDR44Q5JSH3 913 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 CDCA2Q69YH5 1023 aaPredicted RBP20.81■□□□□ 0.92
CHMP6-201ENST00000325167 C15orf39Q6ZRI6 1047 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 ARMCX2Q7L311 632 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 SLFN11Q7Z7L1 901 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 FBXO16Q8IX29 292 aaPredicted RBP20.81■□□□□ 0.92
CHMP6-201ENST00000325167 RHOT2Q8IXI1 618 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 COG1Q8WTW3 980 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 DHX38Q92620 1227 aaKnown RBP20.81■□□□□ 0.92
CHMP6-201ENST00000325167 ZIC5Q96T25 663 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 MSTO1Q9BUK6 570 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 SELENOOQ9BVL4 669 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 EPC1Q9H2F5 836 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 C1orf112Q9NSG2 853 aa20.81■□□□□ 0.92
CHMP6-201ENST00000325167 ASAP2O43150 1006 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 CAPN15O75808 1086 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 TFRCP02786 760 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 ZBTB48P10074 688 aaPredicted RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 HSPA8P11142 646 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 MAP2K2P36507 400 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 HADHBP55084 474 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 PLCB4Q15147 1175 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 HSDL1Q3SXM5 330 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 GLE1Q53GS7 698 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 LRRC57Q8N9N7 239 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 SPATA4Q8NEY3 305 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 MS4A4AQ96JQ5 239 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 CYP2C8P10632 490 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 MATR3P43243 847 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 SURF1Q15526 300 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 MSL3Q8N5Y2 521 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 OLIG1Q8TAK6 271 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 HELQQ8TDG4 1101 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 TAS1R2Q8TE23 839 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 PRPF31Q8WWY3 499 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 SEMA4DQ92854 862 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 PARK7Q99497 189 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 BEGAINQ9BUH8 593 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 EFCC1Q9HA90 598 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 SEPT11Q9NVA2 429 aaKnown RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 RBAKQ9NYW8 714 aaPredicted RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 ERAP1Q9NZ08 941 aa20.8■□□□□ 0.92
CHMP6-201ENST00000325167 SUCLA2Q9P2R7 463 aaPredicted RBP20.8■□□□□ 0.92
CHMP6-201ENST00000325167 RBM47A0AV96 593 aaKnown RBP20.79■□□□□ 0.92
CHMP6-201ENST00000325167 BTBD19C9JJ37 291 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 PDE2AO00408 941 aaPredicted RBP20.79■□□□□ 0.92
CHMP6-201ENST00000325167 FTCDO95954 541 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 GH1P01241 217 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 BPIFB4P59827 614 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 LONRF2Q1L5Z9 754 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 ZACNQ401N2 412 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 ZNF484Q5JVG2 852 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 RGMBQ6NW40 437 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 EMID1Q96A84 441 aaPredicted RBP20.79■□□□□ 0.92
CHMP6-201ENST00000325167 KREMEN1Q96MU8 473 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 PNKPQ96T60 521 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 TARS2Q9BW92 718 aaKnown RBP20.79■□□□□ 0.92
CHMP6-201ENST00000325167 ISCUQ9H1K1 167 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 R3HDMLQ9H3Y0 253 aa20.79■□□□□ 0.92
CHMP6-201ENST00000325167 CLDN3O15551 220 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 NCK2O43639 380 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 RTN2O75298 545 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 TOM1L1O75674 476 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 KIF4AO95239 1232 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 TNNI1P19237 187 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 USP8P40818 1118 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 PDE6CP51160 858 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 PRPF4BQ13523 1007 aaKnown RBP20.78■□□□□ 0.92
CHMP6-201ENST00000325167 MAPK6Q16659 721 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 PEX26Q7Z412 305 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 CGRRF1Q99675 332 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 PRDM10Q9NQV6 1147 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 TRPC6Q9Y210 931 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 MYH10P35580 1976 aa20.78■□□□□ 0.92
CHMP6-201ENST00000325167 ADORA2AP29274 412 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 ZNF157P51786 506 aaPredicted RBP20.77■□□□□ 0.92
CHMP6-201ENST00000325167 LAMTOR4Q0VGL1 99 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 CLUL1Q15846 466 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 HDXQ7Z353 690 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 ZNF677Q86XU0 584 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 RPUSD2Q8IZ73 545 aaKnown RBP20.77■□□□□ 0.92
CHMP6-201ENST00000325167 EPS8L1Q8TE68 723 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 POP1Q99575 1024 aaKnown RBP20.77■□□□□ 0.92
CHMP6-201ENST00000325167 CCDC113Q9H0I3 377 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 AMFRQ9UKV5 643 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 ADGRA2Q96PE1 1338 aa20.77■□□□□ 0.92
CHMP6-201ENST00000325167 FAM155AB1AL88 458 aaPredicted RBP20.77■□□□□ 0.91
CHMP6-201ENST00000325167 MAGEB2O15479 319 aa20.77■□□□□ 0.91
CHMP6-201ENST00000325167 C4BPAP04003 597 aaKnown RBP20.77■□□□□ 0.91
CHMP6-201ENST00000325167 MARK3P27448 753 aa20.77■□□□□ 0.91
CHMP6-201ENST00000325167 NLRP11P59045 1033 aaKnown RBP20.77■□□□□ 0.91
CHMP6-201ENST00000325167 POU5F1BQ06416 359 aa20.77■□□□□ 0.91
CHMP6-201ENST00000325167 BRI3BPQ8WY22 251 aa20.77■□□□□ 0.91
CHMP6-201ENST00000325167 NOCTQ9UK39 431 aaKnown RBP20.77■□□□□ 0.91
CHMP6-201ENST00000325167 COL1A2P08123 1366 aa20.76■□□□□ 0.91
CHMP6-201ENST00000325167 PIK3CAP42336 1068 aa20.76■□□□□ 0.91
CHMP6-201ENST00000325167 VSNL1P62760 191 aa20.76■□□□□ 0.91
CHMP6-201ENST00000325167 GPC5P78333 572 aa20.76■□□□□ 0.91
CHMP6-201ENST00000325167 CDR2Q01850 454 aa20.76■□□□□ 0.91
CHMP6-201ENST00000325167 C2orf54Q08AI8 447 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms