RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TSPY1Q01534 308 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 CDR2Q01850 454 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 ATL2Q8NHH9 583 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 TRIM51Q9BSJ1 452 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 KCNQ2O43526 872 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 SCP2P22307 547 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 AP2B1P63010 937 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 NAB2Q15742 525 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 CEP55Q53EZ4 464 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 EFHC2Q5JST6 749 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 ITPRIPL1Q6GPH6 555 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 ZNF473Q8WTR7 871 aaKnown RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 MAP3K14Q99558 947 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 F8W8V4 182 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 H3BRJ5 948 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 NME3Q13232 169 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 CCDC124Q96CT7 223 aaKnown RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 FGD4Q96M96 766 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 KRT82Q9NSB4 513 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 DONSONQ9NYP3 566 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 STAP1Q9ULZ2 295 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 TAF6LQ9Y6J9 622 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 TTC8Q8TAM2 541 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 JPH1Q9HDC5 661 aaPredicted RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 MAD2L2Q9UI95 211 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 GYPCP04921 128 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 UCHL3P15374 230 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 CCNI2Q6ZMN8 369 aaPredicted RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 NUDCD3Q8IVD9 361 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 TRPV6Q9H1D0 765 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 ABCF3Q9NUQ8 709 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 AFF2P51816 1311 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 EIF3DO15371 548 aaKnown RBP eCLIP11.56□□□□□ -0.565e-7■□□□□ 9.8
SNRNP200-201ENST00000323853 PPFIA2O75334 1257 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 ARHGEF6Q15052 776 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 LMBRD2Q68DH5 695 aaPredicted RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 ANKMY2Q8IV38 441 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 DACT3Q96B18 629 aaPredicted RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 GCNAQ96QF7 691 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 KLHL11Q9NVR0 708 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 HACD3Q9P035 362 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 UVRAGQ9P2Y5 699 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 L3MBTL1Q9Y468 752 aa11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.561e-8■■■■■ 30.7
SNRNP200-201ENST00000323853 TRMT10CQ7L0Y3 403 aaKnown RBP11.56□□□□□ -0.56
SNRNP200-201ENST00000323853 ZNF189O75820 626 aaPredicted RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CHN1P15882 459 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 EFNA5P52803 228 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 PDIA6Q15084 440 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CPA5Q8WXQ8 436 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 NRBF2Q96F24 287 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 SENP7Q9BQF6 1050 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 GALCP54803 685 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 BCAR1P56945 870 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 EIF3EP60228 445 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 NOP9Q86U38 636 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 TRIML2Q8N7C3 387 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 PARD3BQ8TEW8 1205 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 SLC13A1Q9BZW2 595 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 SUN2Q9UH99 717 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 FHOD1Q9Y613 1164 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 PITPNM2Q9BZ72 1349 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 NTSR2O95665 410 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 PRKCBP05771 671 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 LCP1P13796 627 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 STK4Q13043 487 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 P3H1Q32P28 736 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 AGBL2Q5U5Z8 902 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 SPATA21Q7Z572 469 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 RASA1P20936 1047 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 HIF1AQ16665 826 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 TWF2Q6IBS0 349 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 NDUFAF2Q8N183 169 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 DHX35Q9H5Z1 703 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 PDHBP11177 359 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CDH6P55285 790 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 SPP2Q13103 211 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 HABP4Q5JVS0 413 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 RAPGEF5Q92565 580 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 STOML1Q9UBI4 398 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 PPME1Q9Y570 386 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 A8MXQ7 604 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 LRRC31Q6UY01 552 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 TEX2Q8IWB9 1127 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 DAGLBQ8NCG7 672 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CDC26Q8NHZ8 85 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 FAM161BQ96MY7 647 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 NRXN1Q9ULB1 1477 aa11.55□□□□□ -0.56
SNRNP200-201ENST00000323853 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 461.1 ms