RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 EPB41P11171 864 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 PSMC2P35998 433 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 MAGEA10P43363 369 aaPredicted RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 FAM189BP81408 668 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 C16orf59Q7L2K0 433 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 NXF3Q9H4D5 531 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 ELAC1Q9H777 363 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 PCDH10Q9P2E7 1040 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 HES2Q9Y543 173 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 TPM4P67936 248 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 POU5F1Q01860 360 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 SNRNP35Q16560 246 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 TCTN1Q2MV58 587 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 TMEM240Q5SV17 173 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 FILIP1Q7Z7B0 1213 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 MRPL10Q7Z7H8 261 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 FAM114A1Q8IWE2 563 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 AOPEPQ8N6M6 819 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 SMG8Q8ND04 991 aaKnown RBP23.03■■□□□ 1.28
YBX1-201ENST00000321358 LINC01599Q8WXQ3 324 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 EEF2KMTQ96G04 330 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 ALPK3Q96L96 1907 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 TMEM161AQ9NX61 479 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 SNTG2Q9NY99 539 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 NFE2L3Q9Y4A8 694 aa23.03■■□□□ 1.28
YBX1-201ENST00000321358 TANC1Q9C0D5 1861 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.02■■□□□ 1.28
YBX1-201ENST00000321358 IKBKBO14920 756 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 SEZ6Q53EL9 994 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 USP37Q86T82 979 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 FAM186BQ8IYM0 893 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 CEP120Q8N960 986 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 FAM200AQ8TCP9 573 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 FBXL18Q96ME1 805 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.02■■□□□ 1.288e-7■■■□□ 18.6
YBX1-201ENST00000321358 MKNK1Q9BUB5 465 aa23.02■■□□□ 1.28
YBX1-201ENST00000321358 RBAKQ9NYW8 714 aaPredicted RBP23.02■■□□□ 1.28
YBX1-201ENST00000321358 MAGEC2Q9UBF1 373 aaPredicted RBP23.02■■□□□ 1.28
YBX1-201ENST00000321358 CPSF3Q9UKF6 684 aaKnown RBP23.02■■□□□ 1.28
YBX1-201ENST00000321358 GOLGA6L19H0YKK7 550 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 SLC16A3O15427 465 aaKnown RBP23.01■■□□□ 1.27
YBX1-201ENST00000321358 HOXA2O43364 376 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 KRT13P13646 458 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 AKAP5P24588 427 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 EPHB4P54760 987 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 CCDC40Q4G0X9 1142 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 NPAS4Q8IUM7 802 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 CREBRFQ8IUR6 639 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 ZC3H3Q8IXZ2 948 aaKnown RBP23.01■■□□□ 1.27
YBX1-201ENST00000321358 FAM212AQ96EL1 285 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 THAP9Q9H5L6 903 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 GIT1Q9Y2X7 761 aa23.01■■□□□ 1.27
YBX1-201ENST00000321358 CEP290O15078 2479 aa23■■□□□ 1.27
YBX1-201ENST00000321358 H0YGN5 161 aa23■■□□□ 1.27
YBX1-201ENST00000321358 RBAK-RBAKDNI3L0D1 243 aa23■■□□□ 1.27
YBX1-201ENST00000321358 MAPK13O15264 365 aa23■■□□□ 1.27
YBX1-201ENST00000321358 AKAP3O75969 853 aa23■■□□□ 1.27
YBX1-201ENST00000321358 LRRC55Q6ZSA7 311 aa23■■□□□ 1.27
YBX1-201ENST00000321358 CBWD2Q8IUF1 395 aa23■■□□□ 1.27
YBX1-201ENST00000321358 CD302Q8IX05 232 aa23■■□□□ 1.27
YBX1-201ENST00000321358 ABI1Q8IZP0 508 aa23■■□□□ 1.27
YBX1-201ENST00000321358 HERVK_113Q902F9 699 aa23■■□□□ 1.27
YBX1-201ENST00000321358 MED15Q96RN5 788 aa23■■□□□ 1.27
YBX1-201ENST00000321358 PLEKHA5Q9HAU0 1116 aa23■■□□□ 1.27
YBX1-201ENST00000321358 CBX8Q9HC52 389 aa23■■□□□ 1.27
YBX1-201ENST00000321358 METTL14Q9HCE5 456 aaKnown RBP23■■□□□ 1.27
YBX1-201ENST00000321358 SIP14410 1827 aa23■■□□□ 1.27
YBX1-201ENST00000321358 FAM189A1O60320 539 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 RECQL4O94761 1208 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 IL18RAPO95256 599 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 TNFSF9P41273 254 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 CASP4P49662 377 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 WDR5P61964 334 aaKnown RBP22.99■■□□□ 1.27
YBX1-201ENST00000321358 PPP2R3AQ06190 1150 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 SURF1Q15526 300 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 ZBTB41Q5SVQ8 909 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 GLB1LQ6UWU2 654 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.99■■□□□ 1.278e-25■■■■□ 19.6
YBX1-201ENST00000321358 INTS8Q75QN2 995 aaKnown RBP22.99■■□□□ 1.27
YBX1-201ENST00000321358 FNBP1Q96RU3 617 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 UBE2OQ9C0C9 1292 aaKnown RBP22.99■■□□□ 1.27
YBX1-201ENST00000321358 RNF39Q9H2S5 420 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 RSAD1Q9HA92 442 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 SLC4A7Q9Y6M7 1214 aa22.99■■□□□ 1.27
YBX1-201ENST00000321358 UPP2O95045 317 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 CXCL8P10145 99 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 CRELD2Q6UXH1 353 aaPredicted RBP22.98■■□□□ 1.27
YBX1-201ENST00000321358 ZNF598Q86UK7 904 aaKnown RBP22.98■■□□□ 1.27
YBX1-201ENST00000321358 BRSK2Q8IWQ3 736 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 LPPQ93052 612 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 RPS6KC1Q96S38 1066 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 ARMCX3Q9UH62 379 aaPredicted RBP22.98■■□□□ 1.27
YBX1-201ENST00000321358 CDK11BP21127 795 aaKnown RBP22.98■■□□□ 1.27
YBX1-201ENST00000321358 CYP24A1Q07973 514 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 ENOX2Q16206 610 aaKnown RBP22.98■■□□□ 1.27
YBX1-201ENST00000321358 FRMD5Q7Z6J6 570 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 TMEM192Q8IY95 271 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 ZSWIM2Q8NEG5 633 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 ANKRD20A12PQ8NF67 263 aa22.98■■□□□ 1.27
YBX1-201ENST00000321358 RSPH1Q8WYR4 309 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms